Big Tree: Person Data

Tree Position

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Blocks	Names	Region	McDonald BED	combBED	STR	1kG NA19384
18706870-A-G	16594990-A-G	S845	Z17684 FGC20559 AMM331		Y	Y		+
13832932-G-A	11712226-G-A		FT328600					+
15463060-T-C	13351180-T-C	BY3195	Y50683		Y	Y		+
28633856-G-A	26487709-G-A		CTS12601			Y		+
2740432-A-C	2872391-A-C		CTS121		Y	Y		+
16432104-C-T	14320224-C-T		FT74123		Y	Y		+
15804593-C-T	13692713-C-T		CTS4770		Y			+
3875652-A-G	4007611-A-G							+
5190964-T-C	5322923-T-C		FT323049					+
7459396-C-T	7591355-C-T	FT183601	BY15081	IR1_L				+
22444154-G-T	20282268-G-T			DYZ19				+
23411411-G-C	21249525-G-C		CTS11999		Y	Y		+
22298756-G-A	20136870-G-A			DYZ19				+
16503655-G-A	14391775-G-A		CTS5845		Y	Y		+
2694271-T-C	2826230-T-C		FT294538		Y	Y		+
2737408-C-G	2869367-C-G		M8521 V1045		Y	Y		+
2754170-G-A	2886129-G-A		FT294553		Y	Y		+
2773948-T-C	2905907-T-C		CTS162		Y	Y		+
2801320-G-A	2933279-G-A		M8522 V1073		Y	Y		+
2812679-C-G	2944638-C-G		M8523 CTS210 V1093		Y	Y		+
2828710-G-A	2960669-G-A		CTS226		Y	Y		+
2861997-C-T	2993956-C-T		FT294589		Y	Y		+
3041058-C-A	3173017-C-A		FT144658					+
3072762-T-C	3204721-T-C		FT315960					+
3099278-G-T	3231237-G-T		FT316067					+
3099279-G-A	3231238-G-A		FT316068					+
3141979-A-G	3273938-A-G							+
3158370-A-G	3290329-A-G		FT316269					+
3196426-T-C	3328385-T-C		FT316391					+
3459588-C-T	3591547-C-T		FT317316					+
3514764-G-C	3646723-G-C		FT317518					+
3547589-G-A	3679548-G-A		FT317673					+
3557622-A-G	3689581-A-G		FT317716					+
3594211-T-G	3726170-T-G		FT317853					+
3663054-C-T	3795013-C-T		FT318054					+
3726637-T-A	3858596-T-A		FT318273					+
3825473-G-A	3957432-G-A		FT318612					+
3879340-G-A	4011299-G-A							+
3914394-G-A	4046353-G-A		FT318932					+
3933053-C-T	4065012-C-T		FT318981					+
3938973-A-T	4070932-A-T		FT144919					+
3992793-G-A	4124752-G-A		FT319167					+
4040748-T-A	4172707-T-A		FT319319					+
4055810-C-T	4187769-C-T		FT319381					+
4101247-A-G	4233206-A-G		FT319510					+
4155887-T-A	4287846-T-A		FT319712					+
4223962-G-A	4355921-G-A							+
4264863-C-T	4396822-C-T							+
4294293-A-T	4426252-A-T							+
4326043-A-G	4458002-A-G		FT320303					+
4340475-T-C	4472434-T-C		FT145053					+
4366069-C-T	4498028-C-T		FT145062					+
4439866-G-A	4571825-G-A		FT320662					+
4497343-A-G	4629302-A-G		FT145091					+
4532720-G-C	4664679-G-C		FT320938					+
4653051-A-G	4785010-A-G		FT321313					+
4737163-T-C	4869122-T-C		Y38157					+
4766179-T-C	4898138-T-C		FT145172					+
4834980-G-A	4966939-G-A		FT321851					+
4861223-G-A	4993182-G-A		FT145199					+
4888316-T-A	5020275-T-A		FT322020					+
5104314-T-G	5236273-T-G		FT322747					+
5119085-G-A	5251044-G-A							+
5172475-G-A	5304434-G-A		FT322981					+
5190890-T-A	5322849-T-A		FT323047					+
5211676-T-G	5343635-T-G		FT323104					+
5294172-G-T	5426131-G-T		Y18028					+
5399502-A-G	5531461-A-G		FT145360					+
5432521-G-C	5564480-G-C		FGC49312					+
5449337-T-G	5581296-T-G		FT323940					+
5484960-A-G	5616919-A-G							+
5572309-T-G	5704268-T-G		FT145413					+
5677911-C-T	5809870-C-T		FT324726					+
5710498-C-T	5842457-C-T		FT215040					+
5757135-T-G	5889094-T-G		FT145457					+
5800881-C-A	5932840-C-A		FT325116					+
5818306-T-C	5950265-T-C		FT325159					+
5868098-C-T	6000057-C-T		FT145487					+
5890052-C-A	6022011-C-A		FT325406					+
5901970-C-T	6033929-C-T		FT325456					+
5950813-C-G	6082772-C-G		FT145512					+
5961338-C-A	6093297-C-A		FT325621					+
5979618-A-G	6111577-A-G		FT325693					+
6022531-C-G	6154490-C-G		FT325873					+
6029900-T-C	6161859-T-C							+
6037264-C-T	6169223-C-T		FT325934					+
6059067-G-A	6191026-G-A		FT325999					+
6372655-C-T	6504614-C-T		BY59898					+
6378943-G-C	6510902-G-C		FT326372					+
6386935-T-C	6518894-T-C		FT326391					+
6397985-T-G	6529944-T-G							+
6416616-A-G	6548575-A-G		FT326486					+
6479203-G-A	6611162-G-A		FT208940					+
6501110-A-G	6633069-A-G		FT326736					+
6521169-T-G	6653128-T-G							+
6540641-G-T	6672600-G-T		FT326862					+
6574967-G-A	6706926-G-A		FT326872					+
6622195-T-G	6754154-T-G		FT294606		Y			+
6631811-T-C	6763770-T-C		M8525		Y	Y		+
6632124-A-G	6764083-A-G		FT294610		Y	Y		+
6636899-C-T	6768858-C-T		M8526		Y	Y		+
6694737-T-C	6826696-T-C		CTS334		Y	Y		+
6785815-C-T	6917774-C-T		BY61294		Y	Y		+
6829850-C-T	6961809-C-T		CTS539		Y			+
6844619-G-T	6976578-G-T		CTS559		Y	Y		+
6858878-G-A	6990837-G-A		M8535		Y	Y		+
6872911-T-C	7004870-T-C		CTS591		Y	Y		+
6879456-G-A	7011415-G-A		M8536 CTS599		Y	Y		+
6958165-C-A	7090124-C-A		PAGES00072 M8537 Page72		Y	Y		+
6989833-C-T	7121792-C-T		FT294726		Y	Y		+
7070091-G-A	7202050-G-A		CTS888		Y	Y		+
7118212-C-G	7250171-C-G		CTS973		Y			+
7164842-G-A	7296801-G-A		CTS1039		Y	Y		+
7237231-G-A	7369190-G-A				Y			+
7257651-A-G	7389610-A-G		FT294826		Y			+
7283049-G-T	7415008-G-T		CTS1227		Y	Y		+
7297516-A-T	7429475-A-T		CTS1255		Y			+
7345384-G-A	7477343-G-A		CTS1334		Y			+
7369383-T-A	7501342-T-A		M8544		Y			+
7385695-A-G	7517654-A-G		CTS1402		Y			+
7395175-T-C	7527134-T-C				Y	Y		+
7417798-C-T	7549757-C-T		BY65109		Y	Y		+
7440119-C-T	7572078-C-T		CTS1493 FGC31731 BY13495		Y			+
7511619-T-G	7643578-T-G		FT294894		Y			+
7542635-C-T	7674594-C-T		FT294911		Y	Y		+
7600181-C-G	7732140-C-G		M8548		Y	Y		+
7622050-T-C	7754009-T-C		FT294949		Y	Y		+
7687530-T-C	7819489-T-C		FT294981		Y	Y		+
7722575-A-G	7854534-A-G		FT294996		Y	Y		+
7730824-G-A	7862783-G-A		FT294998		Y	Y		+
7736046-C-A	7868005-C-A		FT295002		Y	Y		+
7757813-A-C	7889772-A-C		Y18023		Y	Y		+
7757814-T-A	7889773-T-A		Y18024		Y	Y		+
7802928-G-C	7934887-G-C		FT295042		Y	Y		+
7832710-C-T	7964669-C-T		BY68041		Y	Y		+
7834717-T-C	7966676-T-C		FT295052		Y	Y		+
7905743-C-T	8037702-C-T		FT295083		Y	Y		+
7976675-A-G	8108634-A-G		FT295121		Y	Y		+
8036814-A-G	8168773-A-G		FT295147		Y	Y		+
8083470-C-T	8215429-C-T		FT295174		Y	Y		+
8193251-C-G	8325210-C-G		FT295231		Y	Y		+
8205877-C-G	8337836-C-G		FT295239		Y	Y		+
8231698-C-T	8363657-C-T		M8553 V1735		Y	Y		+
8261633-C-T	8393592-C-T		FT295265		Y	Y		+
8263206-C-G	8395165-C-G		FT295267		Y	Y		+
8296296-C-T	8428255-C-T		FT295281		Y			+
8390850-A-G	8522809-A-G		FT295325		Y	Y		+
8406207-G-T	8538166-G-T		FT295337		Y	Y		+
8551720-T-G	8683679-T-G		FT295410		Y	Y		+
8614459-C-T	8746418-C-T		BY74573		Y	Y		+
8675790-C-T	8807749-C-T		FT295483		Y	Y		+
8701430-T-C	8833389-T-C		FT295489		Y	Y		+
8723063-G-A	8855022-G-A				Y	Y		+
8884449-T-C	9016408-T-C		M8563			Y		+
8893496-A-G	9025455-A-G		FT295594			Y		+
9015177-A-G	9177568-A-G		M8565			Y		+
9020427-G-A	9182818-G-A		FT295645			Y		+
9073477-A-C	9235868-A-C		FT295667			Y		+
9075706-C-T	9238097-C-T		FT295669			Y		+
9148828-G-A	9311219-G-A		FT295705			Y		+
9382718-C-T	9545109-C-T				Y			+
9441918-A-G	9604309-A-G		FT295733		Y	Y		+
9776374-C-A	9938765-C-A		FT328294		Y			+
9805668-A-G	9968059-A-G		FT295752		Y	Y		+
9811384-C-T	9973775-C-T		FT295756		Y	Y		+
9902722-T-C	10065113-T-C		FT328371		Y			+
9909928-G-A	10072319-G-A		FT328406		Y			+
9913595-G-A	10075986-G-A				Y			+
9942205-C-T	10104596-C-T				Y			+
9971341-A-T	10133732-A-T				Y			+
9984212-G-A	10146603-G-A		BY47570		Y			+
9998954-T-C	10161345-T-C				Y			+
10000668-C-T	10163059-C-T				Y			+
10037656-G-A	10200047-G-A		BY83318					+
10075558-G-A	10237949-G-A							+
10076297-A-G	10238688-A-G							+
13135642-G-A	10625128-G-A							+
13346549-T-C	11190873-T-C							+
13351119-G-A	11195443-G-A							+
13395487-G-A	11239811-G-A							+
13413263-C-T	11257587-C-T							+
13498138-A-T	11342462-A-T							+
13577428-G-T	11421752-G-T							+
13578172-T-C	11422496-T-C		FT415240					+
13612432-C-T	11456756-C-T							+
13630589-C-T	11474913-C-T							+
13632076-A-G	11476400-A-G							+
13660017-G-A	11504341-G-A							+
13664135-A-T	11508459-A-T		FT415241					+
13678211-G-C	11522535-G-C		FT415242					+
13823420-A-T	11702714-A-T		FT328529					+
13828363-A-G	11707657-A-G		FT328578					+
13836586-T-A	11715880-T-A		FT328626					+
13849407-G-A	11728701-G-A		FT328725					+
13853367-G-A	11732661-G-A		FT328755					+
13930961-C-A	11810255-C-A		FT295863		Y			+
13939014-T-G	11818308-T-G		FT295873		Y			+
13966816-C-A	11846110-C-A		CTS1563		Y			+
13982298-G-A	11861592-G-A		CTS1601		Y			+
14005668-A-C	11884962-A-C		FT295919		Y	Y		+
14016215-C-A	11895509-C-A		M8572 CTS1683		Y			+
14023501-G-A	11902795-G-A		CTS1699		Y	Y		+
14095983-A-G	11975277-A-G		M8573 CTS1850		Y	Y		+
14131689-G-T	12010983-G-T		CTS1953		Y			+
14206183-G-T	12085477-G-T		M8575		Y	Y		+
14215408-G-A	12094702-G-A		BY178622		Y	Y		+
14230885-C-A	12110179-C-A		FT125052		Y	Y		+
14246690-G-A	12125984-G-A		FT296050		Y	Y		+
14268257-C-A	12147551-C-A		CTS2341		Y			+
14287946-A-G	12167240-A-G		CTS2391		Y	Y		+
14299664-C-T	12178958-C-T		FT296081		Y	Y		+
14353884-C-T	12233179-C-T		CTS2538		Y	Y		+
14356720-G-A	12236015-G-A		CTS2542 M8578		Y	Y		+
14389603-A-C	12268899-A-C		FT296134		Y	Y		+
14444015-C-T	12323288-C-T				Y			+
14466602-A-G	12345875-A-G		CTS2756		Y	Y		+
14618343-T-C	12506541-T-C		CTS3026		Y			+
14713873-T-C	12601940-T-C		CTS3191		Y	Y		+
14758427-G-T	12646496-G-T		CTS3236		Y			+
14810510-C-T	12698581-C-T		FT296295		Y	Y		+
15003726-G-A	12891811-G-A		FT296354		Y	Y		+
15053676-C-A	12941767-C-A		M8585 CTS3596 V2795		Y	Y		+
15118832-A-G	13006919-A-G		FT296381		Y			+
15118942-T-A	13007029-T-A		CTS3710		Y			+
15164391-C-A	13052477-C-A		FT296396		Y	Y		+
15211327-G-C	13099413-G-C		CTS3824		Y	Y		+
15272326-C-G	13160415-C-G		FT296422		Y	Y		+
15307015-C-A	13195117-C-A		CTS3979		Y	Y		+
15347013-C-T	13235132-C-T		CTS4035		Y	Y		+
15377422-A-G	13265542-A-G		FT296457		Y			+
15394642-G-T	13282762-G-T		CTS4096 M8589		Y			+
15407604-C-G	13295724-C-G		CTS4121		Y	Y		+
15408182-C-T	13296302-C-T		CTS4123 M8590		Y	Y		+
15464198-T-A	13352318-T-A		M8591		Y	Y		+
15517935-C-A	13406055-C-A		CTS4251		Y	Y		+
15623638-T-C	13511758-T-C		CTS4382		Y	Y		+
15647683-G-A	13535803-G-A		Y137223		Y			+
15879968-C-A	13768088-C-A		FT296666		Y	Y		+
15884559-T-C	13772679-T-C		FT390430		Y			+
15936740-C-G	13824860-C-G		FT296688		Y	Y		+
16007597-T-A	13895717-T-A		FT296713		Y			+
16074112-A-T	13962232-A-T		PH2028		Y			+
16332538-C-T	14220658-C-T		CTS5511		Y	Y		+
16342124-G-C	14230244-G-C		FT296816		Y	Y		+
16406535-T-G	14294655-T-G		CTS5639		Y	Y		+
16449943-C-T	14338063-C-T				Y	Y		+
16471066-T-C	14359186-T-C		CTS5763		Y			+
16486339-G-T	14374459-G-T		CTS5797 M8601		Y	Y		+
16512593-T-G	14400713-T-G		CTS5859		Y	Y		+
16528014-C-T	14416134-C-T		FT296893		Y	Y		+
16528370-A-G	14416490-A-G		CTS5878		Y	Y		+
16568196-T-C	14456316-T-C		M8602		Y	Y		+
16592099-C-G	14480219-C-G		CTS5982 M8603		Y	Y		+
16644467-A-C	14532587-A-C		FT296942		Y	Y		+
16692102-A-G	14580222-A-G		FT296963		Y	Y		+
16809305-T-C	14697425-T-C		CTS6299 M8606		Y	Y		+
16817435-T-C	14705555-T-C		CTS6318		Y	Y		+
16854801-G-A	14742921-G-A		CTS6369		Y	Y		+
16908886-G-A	14797006-G-A		CTS6456		Y	Y		+
16916422-C-T	14804542-C-T		CTS6462		Y	Y		+
16976621-A-T	14864741-A-T		CTS6548		Y			+
16977999-T-C	14866119-T-C		CTS6555		Y			+
16985450-C-T	14873570-C-T		CTS6570		Y	Y		+
16988506-T-C	14876626-T-C		CTS6575 M8607		Y	Y		+
17020110-G-T	14908230-G-T		FT297096		Y	Y		+
17097312-T-A	14985432-T-A		CTS6762		Y			+
17178445-G-A	15066565-G-A		FT297165		Y	Y		+
17192592-A-T	15080712-A-T		FT297171		Y	Y		+
17231636-C-A	15119756-C-A		CTS7007		Y	Y		+
17255471-G-T	15143591-G-T		FT297201		Y	Y		+
17298997-G-GGATA	15187117-G-GGATA						5×GATA	+
17456634-G-T	15344754-G-T		FT297278		Y	Y		+
17458857-A-T	15346977-A-T		FT297280		Y	Y		+
17471207-G-A	15359327-G-A		CTS7419		Y	Y		+
17471820-A-G	15359940-A-G		M8614		Y	Y		+
17508142-T-C	15396262-T-C		CTS7495		Y	Y		+
17531621-T-G	15419741-T-G		M8616		Y	Y		+
17568812-C-T	15456932-C-T		FT297330		Y	Y		+
17592490-A-T	15480610-A-T		CTS7656		Y	Y		+
17598136-G-A	15486256-G-A		CTS7663		Y	Y		+
17614632-A-T	15502752-A-T		CTS7685		Y	Y		+
17626970-G-A	15515090-G-A		FT297353		Y			+
17627523-C-G	15515643-C-G		M8617		Y			+
17645307-G-A	15533427-G-A		CTS7750		Y	Y		+
17659832-T-G	15547952-T-G		FT297367		Y	Y		+
17712208-G-A	15600328-G-A		CTS7861 M8619		Y	Y		+
17721132-T-C	15609252-T-C		CTS7874		Y	Y		+
17726474-T-G	15614594-T-G				Y			+
17753780-T-C	15641900-T-C		FT297395		Y	Y		+
17758206-T-G	15646326-T-G		CTS7947		Y	Y		+
17805243-C-A	15693363-C-A		CTS8036		Y	Y		+
17810050-G-C	15698170-G-C		CTS8045		Y	Y		+
17810347-C-A	15698467-C-A		CTS8046		Y	Y		+
17820762-T-A	15708882-T-A		CTS8067		Y	Y		+
17832176-C-G	15720296-C-G		FT297435		Y	Y		+
17861474-C-T	15749594-C-T		FT297452		Y	Y		+
17871703-C-T	15759823-C-T		CTS8192		Y	Y		+
17917899-C-T	15806019-C-T		FT297484		Y	Y		+
17930177-T-C	15818297-T-C		CTS8312 M8620		Y			+
17945313-C-T	15833433-C-T		FT297501		Y	Y		+
17955866-A-C	15843986-A-C				Y	Y		+
17958770-T-G	15846890-T-G		CTS8362 M8622		Y	Y		+
18044427-A-T	15932547-A-T		FT297540		Y	Y		+
18049010-C-A	15937130-C-A		CTS8485		Y	Y		+
18061594-T-C	15949714-T-C		CTS8515		Y	Y		+
18064622-A-G	15952742-A-G		FT297549		Y	Y		+
18074053-G-A	15962173-G-A		FT297555		Y	Y		+
18081095-C-T	15969215-C-T		CTS8551		Y	Y		+
18110954-A-T	15999074-A-T		CTS8614		Y	Y		+
18387494-C-T	16275614-C-T		Y18026	P6_Gap				+
18420357-TAAAAAAAAGA-T	16308477-TAAAAAAAAGA-T			P6_Gap			8×A	+
18425045-T-C	16313165-T-C		FT297696	P6_Gap				+
18600375-A-G	16488495-A-G		FT297719		Y	Y		+
18616474-A-C	16504594-A-C		FT297726		Y	Y		+
18641901-G-A	16530021-G-A		FT297737		Y	Y		+
18649870-G-T	16537990-G-T		CTS9068		Y	Y		+
18667515-G-C	16555635-G-C		CTS9090 M8624 V3381		Y	Y		+
18689177-T-C	16577297-T-C		FT297750		Y	Y		+
18696602-G-T	16584722-G-T		FT297754		Y	Y		+
18698831-C-G	16586951-C-G				Y	Y		+
18712140-A-G	16600260-A-G		CTS9144		Y	Y		+
18754056-C-T	16642176-C-T		CTS9216		Y	Y		+
18787351-C-T	16675471-C-T		CTS9265		Y	Y		+
18820084-G-A	16708204-G-A		CTS9319		Y	Y		+
18831580-T-G	16719700-T-G		FT297807		Y	Y		+
18891947-T-C	16780067-T-C		CTS9433		Y	Y		+
18903833-G-A	16791953-G-A		CTS9453		Y	Y		+
18916748-G-A	16804868-G-A		FT297844		Y	Y		+
18940112-C-T	16828232-C-T		CTS9504		Y	Y		+
18958249-G-A	16846369-G-A		CTS9549		Y	Y		+
19069909-C-G	16958029-C-G		CTS9785		Y	Y		+
19072340-A-T	16960460-A-T		FT297910		Y			+
19083880-G-A	16972000-G-A				Y			+
19095865-C-T	16983985-C-T		CTS9834		Y	Y		+
19152071-G-T	17040191-G-T		FT297953		Y	Y		+
19174046-T-G	17062166-T-G		CTS9960		Y			+
19197872-G-A	17085992-G-A		M8631		Y	Y		+
19243735-T-C	17131855-T-C		FT297992		Y	Y		+
19283093-C-T	17171213-C-T		FT298011		Y	Y		+
19285988-T-C	17174108-T-C		CTS10143		Y	Y		+
19302603-C-A	17190723-C-A		CTS10166		Y			+
19302678-C-T	17190798-C-T		CTS10167		Y			+
19340785-A-G	17228905-A-G		FT298040		Y	Y		+
19355048-T-C	17243168-T-C		CTS10261		Y			+
19363733-C-A	17251853-C-A		FT298053		Y	Y		+
19417588-G-C	17305708-G-C		CTS10350		Y			+
19520273-C-T	17408393-C-T		FT298130		Y	Y		+
19531490-C-T	17419610-C-T		CTS10549		Y	Y		+
20804626-T-C	18642740-T-C		FT298151	P4_Gap				+
20822707-T-C	18660821-T-C		BY212640	P4_Gap				+
21048785-C-G	18886899-C-G				Y			+
21053952-G-A	18892066-G-A		FT298180		Y	Y		+
21066866-T-C	18904980-T-C		FT298187		Y	Y		+
21076821-C-T	18914935-C-T		FT298194		Y	Y		+
21085302-G-A	18923416-G-A				Y	Y		+
21087030-C-G	18925144-C-G		FT298206		Y	Y		+
21174069-C-T	19012183-C-T		BY9262 FGC51663		Y	Y		+
21193523-G-C	19031637-G-C		M8635		Y	Y		+
21231281-A-C	19069395-A-C		FT298293		Y	Y		+
21248105-A-C	19086219-A-C		FT298299		Y			+
21263425-C-T	19101539-C-T		FT298312		Y	Y		+
21275194-C-T	19113308-C-T		FT298322		Y			+
21356005-T-C	19194119-T-C		BY185693		Y	Y		+
21391851-G-A	19229965-G-A		M8640		Y	Y		+
21402029-T-C	19240143-T-C		FT298419		Y	Y		+
21446957-A-G	19285071-A-G		BY132984		Y	Y		+
21469036-C-T	19307150-C-T		FT298463		Y	Y		+
21512419-A-G	19350533-A-G		FT298502		Y	Y		+
21535052-C-A	19373166-C-A		FT298513		Y			+
21577109-A-C	19415223-A-C				Y			+
21597897-T-C	19436011-T-C		FT298557		Y			+
21644505-C-G	19482619-C-G		FT298579		Y	Y		+
21650141-T-A	19488255-T-A		FT298584		Y	Y		+
21690291-C-T	19528405-C-T		FT298607		Y	Y		+
21738268-A-G	19576382-A-G		Y77042		Y	Y		+
21761947-A-T	19600061-A-T		FT298638		Y	Y		+
21767959-C-T	19606073-C-T		M112		Y	Y		+
21784347-C-T	19622461-C-T		FT298653		Y	Y		+
21786816-A-G	19624930-A-G		FT298658		Y			+
21849397-G-C	19687511-G-C		FT298701		Y			+
21888634-T-C	19726748-T-C		FT298726		Y	Y		+
21906427-C-A	19744541-C-A		FT298736		Y	Y		+
21927923-T-A	19766037-T-A		FT298744		Y	Y		+
21975540-T-G	19813654-T-G		FT298770		Y	Y		+
22011930-T-A	19850044-T-A		FT298805		Y			+
22047217-G-C	19885331-G-C		FT298818		Y	Y		+
22104647-C-A	19942761-C-A		FT298852		Y	Y		+
22114536-G-C	19952650-G-C		M8645		Y	Y		+
22137240-G-C	19975354-G-C		FT298869		Y	Y		+
22154421-C-G	19992535-C-G				Y			+
22175999-A-G	20014113-A-G		M8647		Y	Y		+
22193981-T-C	20032095-T-C				Y			+
22210505-G-T	20048619-G-T		Y20670		Y			+
22233163-G-T	20071277-G-T			DYZ19				+
22237826-T-C	20075940-T-C		BY15101	DYZ19				+
22259769-G-A	20097883-G-A			DYZ19				+
22259795-T-G	20097909-T-G			DYZ19				+
22277373-G-C	20115487-G-C			DYZ19				+
22279661-C-G	20117775-C-G			DYZ19				+
22280855-G-T	20118969-G-T			DYZ19				+
22281246-G-A	20119360-G-A		BY15103	DYZ19				+
22293549-A-T	20131663-A-T		BY46333	DYZ19				+
22301761-G-A	20139875-G-A			DYZ19				+
22334867-G-A	20172981-G-A			DYZ19				+
22428336-C-G	20266450-C-G			DYZ19				+
22437108-G-C	20275222-G-C		BY9684	DYZ19				+
22445084-T-A	20283198-T-A			DYZ19				+
22445732-C-A	20283846-C-A			DYZ19				+
22458159-A-T	20296273-A-T		BY220060	DYZ19				+
22460741-T-G	20298855-T-G			DYZ19				+
22464477-A-T	20302591-A-T			DYZ19				+
22464494-G-A	20302608-G-A			DYZ19				+
22466976-C-T	20305090-C-T			DYZ19				+
22469158-G-C	20307272-G-C		BY222197	DYZ19				+
22471305-C-A	20309419-C-A		FT459255	DYZ19				+
22473647-G-C	20311761-G-C		BY184409	DYZ19				+
22473782-A-G	20311896-A-G		BY222988	DYZ19				+
22476590-G-T	20314704-G-T		FT459882	DYZ19				+
22483747-C-T	20321861-C-T			DYZ19				+
22485656-T-C	20323770-T-C			DYZ19				+
22486768-T-A	20324882-T-A			DYZ19				+
22508849-C-T	20346963-C-T			DYZ19				+
22545399-G-A	20383513-G-A		FT298957		Y			+
22562821-C-T	20400935-C-T		FT182425		Y	Y		+
22564809-T-C	20402923-T-C		FT298978		Y	Y		+
22576530-T-G	20414644-T-G		Y17858		Y	Y		+
22582871-C-T	20420985-C-T		FT298988		Y	Y		+
22596245-T-G	20434359-T-G		FT298994		Y	Y		+
22627485-T-G	20465599-T-G		FT299012		Y	Y		+
22698865-A-G	20536979-A-G		CTS10675		Y	Y		+
22706365-C-A	20544479-C-A		CTS10686		Y	Y		+
22729936-A-G	20568050-A-G		FT299056		Y	Y		+
22802815-G-A	20640929-G-A		FT299088		Y	Y		+
22872796-A-T	20710910-A-T		CTS10987		Y			+
22886713-G-C	20724827-G-C		CTS11002		Y	Y		+
22930241-C-T	20768355-C-T		CTS11070		Y	Y		+
22962303-C-T	20800417-C-T		CTS11116		Y	Y		+
22980230-A-T	20818344-A-T		CTS11151		Y			+
22991064-A-G	20829178-A-G		CTS11180		Y	Y		+
22999492-A-T	20837606-A-T		CTS11189		Y	Y		+
23057447-G-A	20895561-G-A		FT299190		Y	Y		+
23115827-C-T	20953941-C-T		CTS11450		Y	Y		+
23125630-C-T	20963744-C-T		CTS11469		Y	Y		+
23143577-C-A	20981691-C-A		CTS11508		Y			+
23168437-C-T	21006551-C-T				Y			+
23187137-T-G	21025251-T-G		FT299256		Y			+
23195550-G-A	21033664-G-A		CTS11621		Y			+
23196306-G-A	21034420-G-A		PH5357		Y			+
23279322-A-T	21117436-A-T		FT299291		Y	Y		+
23281928-C-T	21120042-C-T		CTS11798		Y	Y		+
23297975-G-A	21136089-G-A		CTS11825		Y	Y		+
23298813-G-T	21136927-G-T		CTS11829		Y	Y		+
23398609-T-C	21236723-T-C		CTS11975 M9388		Y			+
23430306-G-A	21268420-G-A		FT299345		Y	Y		+
23446926-C-T	21285040-C-T		FT299351		Y	Y		+
23466289-T-C	21304403-T-C		FT299354		Y	Y		+
23470235-G-T	21308349-G-T		M8656		Y	Y		+
23487864-C-A	21325978-C-A		FT299367		Y	Y		+
23490117-T-C	21328231-T-C		M8658		Y	Y		+
23654651-C-A	21492765-C-A		FT332469		Y			+
23751691-C-T	21589805-C-T		FT299441			Y		+
23771978-G-T	21610092-G-T		FT299454			Y		+
23776442-A-G	21614556-A-G		FT299456			Y		+
23790758-C-T	21628872-C-T		BY147716			Y		+
23802773-T-G	21640887-T-G		FT299464			Y		+
23813446-A-G	21651560-A-G		M8663			Y		+
23822962-T-C	21661076-T-C		FT299475			Y		+
23854415-G-T	21692529-G-T		FT299491			Y		+
23876355-C-T	21714469-C-T							+
23899198-C-T	21737312-C-T							+
23976132-C-T	21829985-C-T		M8666			Y		+
24006489-C-G	21860342-C-G		FT332733		Y			+
24366190-T-C	22220043-T-C		FT332780					+
24387990-A-G	22241843-A-G							+
24391629-T-C	22245482-T-C		M8667			Y		+
24427595-G-C	22281448-G-C		FT299546			Y		+
24454609-G-T	22308462-G-T		FT299562			Y		+
24472868-A-G	22326721-A-G		M8669			Y		+
24475511-A-G	22329364-A-G		FT299567			Y		+
28085884-T-C	25939737-T-C			P1_Y2				+
28483762-C-T	26337615-C-T		CTS12119					+
28484889-G-A	26338742-G-A		M8671					+
28612372-T-G	26466225-T-G					Y		+
28664245-A-G	26518098-A-G		M8672					+
28668290-T-G	26522143-T-G		FT299695					+
28708219-G-A	26562072-G-A		M8673					+
28711006-C-A	26564859-C-A		M8674			Y		+
28731027-G-C	26584880-G-C		CTS12872					+
28786238-T-C	26640091-T-C		FT415247					+
28787646-G-A	26641499-G-A		FT415248					+
28799266-A-G	26653119-A-G		Y18027					+
58838592-T-C	56752279-A-G							+
58991095-A-T	56844948-A-T							+

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

1k Genomes

Tree Position

Unique Mutations