Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > DF106 > DF104 > DF105 > A738 > FGC40502

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
AUPEW
8863352-G-T 8995311-G-T FGC40501 YY+
21548947-T-C 19387061-T-C FGC40508 YY+
8541819-A-G 8673778-A-G FGC40500 YY+
6039240-C-T 6171199-C-T FGC40499 +
5796158-A-G 5928117-A-G FGC40498 +
5237622-G-A 5369581-G-A FGC40497 +
15288596-A-G 13176695-A-G FGC40504 Y+
4711462-A-G 4843421-A-G FGC40496 +
3254656-A-G 3386615-A-G FGC40494 +
3169688-A-G 3301647-A-G FGC40493 +
18400902-A-G 16289022-A-G FGC40506 P6_Gap +
22885457-T-G 20723571-T-G FGC40510 YY+
22853666-G-T 20691780-G-T FGC40509 Y+
14687683-AT-A 12575749-AT-A +
18062542-G-A 15950662-G-A FGC40505 YY+
4269703-G-A 4401662-G-A FGC40495 *
13903526-G-T 11782820-G-T FGC40503 Y*
28478036-T-TAGAG 26331889-T-TAGAG **
15270995-G-A 13159084-G-A **
24910853-C-CATATATATATAT 22764706-C-CATATATATATAT g1 26×AT**
22852071-G-A 20690185-G-A **
22852069-G-A 20690183-G-A **
22852068-T-C 20690182-T-C **
22852060-C-G 20690174-C-G **
19015209-A-G 16903329-A-G **
19100551-A-T 16988671-A-T **
23102667-G-C 20940781-G-C **
22297142-C-T 20135256-C-T DYZ19 **
14747534-AAATAAT-A 12635603-AAATAAT-A 12×AAT**
15639616-TA-T 13527736-TA-T **
16069871-TA-T 13957991-TA-T 11×A**
58912881-T-G 56677990-A-C **
10024254-CTCTG-C 10186645-CTCTG-C **
7851283-TTTTG-T 7983242-TTTTG-T 6×TTTG**
58881574-GTCCAT-G 56709280-TAATGG-T **
23086784-T-C 20924898-T-C **
23102677-T-C 20940791-T-C **
6450448-G-T 6582407-G-T **
10024281-T-A 10186672-T-A **
3746224-C-CA 3878183-C-CA 13×A**
6059545-C-CA 6191504-C-CA 12×A**
3208487-T-C 3340446-T-C **
10024273-T-C 10186664-T-C **
5350042-T-C 5482001-T-C **
16206876-T-A 14094996-T-A **
24374720-G-A 22228573-G-A **
3635407-G-T 3767366-G-T **
23102686-T-G 20940800-T-G **
18996884-CTT-C 16885004-CTT-C 13×T**
3635418-G-A 3767377-G-A **
3635420-C-G 3767379-C-G **
17265905-G-A 15154025-G-A **
4446862-T-A 4578821-T-A **
15853624-C-T 13741744-C-T **
19138110-CTA-C 17026230-CTA-C 9×TA**
9521986-ATATCTATCTATC-A 9684377-ATATCTATCTATC-A 12×TATC**
59033249-G-T 56887102-G-T **
2791136-T-A 2923095-T-A **
13262256-A-T 11106580-A-T **
5179577-CAT-C 5311536-CAT-C **
9983925-G-A 10146316-G-A **
24416983-G-GA 22270836-G-GA 9×A**
27339225-C-T 25193078-C-T P1_g3 **
21386970-T-C 19225084-T-C **
14418140-GTATATATATATGTATATATA-G 12297437-G-GTA **
4702888-ATGTG-A 4834847-ATGTG-A 15×TG**
14131089-T-A 12010383-T-A **
13349095-T-C 11193419-T-C **
9429186-T-C 9591577-T-C **
13254657-A-G 11098981-A-G **
13349093-T-C 11193417-T-C **
7002959-C-T 7134918-C-T **
25907849-C-A 23761702-C-A P1_Y1 **
58843310-T-G 56747561-A-C **
6591336-C-T 6723295-C-T **
26295569-G-T 24149422-G-T P1_Y1 ***
26310957-A-T 24164810-A-T P1_Y1 ***
25444493-C-T 23298346-C-T P2_r2 ***
26352122-C-T 24205975-C-T P1_Y1 ***
26265127-T-C 24118980-T-C P1_Y1 ***
25497185-T-C 23351038-T-C P2_r2 ***
26201206-C-T 24055059-C-T P1_Y1 ***
25907810-A-G 23761663-A-G P1_Y1 ***
25350163-T-A 23204016-T-A P2_r1 ***
26399907-T-C 24253760-T-C P1_Y1 ***
25442749-G-T 23296602-G-T P2_r2 ***
26496094-C-A 24349947-C-A P1_Y1 ***
26507338-G-A 24361191-G-A P1_Y1 ***
26134408-T-C 23988261-T-C P1_Y1 ***
22328309-T-A 20166423-T-A DYZ19 ***
25321329-A-T 23175182-A-T P2_r1 ***
26579884-G-A 24433737-G-A P1_g2 ***
25273427-C-A 23127280-C-A P2_r1 ***
22337407-G-A 20175521-G-A DYZ19 ***
25239970-T-C 23093823-T-C P2_r1 ***
26151685-T-A 24005538-T-A P1_Y1 ***
26122365-G-T 23976218-G-T P1_Y1 ***
22321002-C-A 20159116-C-A DYZ19 ***
22308490-A-T 20146604-A-T DYZ19 ***
25847609-T-A 23701462-T-A P1_b3 ***
22308502-C-G 20146616-C-G DYZ19 ***
22311256-C-G 20149370-C-G DYZ19 ***
25845125-C-A 23698978-C-A P1_b3 ***
25845119-A-T 23698972-A-T P1_b3 ***
25845069-A-G 23698922-A-G P1_b3 ***
25931536-G-A 23785389-G-A P1_Y1 ***
25944990-G-T 23798843-G-T P1_Y1 ***
25944999-G-T 23798852-G-T P1_Y1 ***
25698067-C-T 23551920-C-T P1_b3 ***
25967634-C-T 23821487-C-T P1_Y1 ***
25647290-C-T 23501143-C-T P1_b3 ***
25634415-A-G 23488268-A-G P1_b3 ***
25624712-C-T 23478565-C-T P1_b3 ***
25510638-A-C 23364491-A-C P1_gr1 ***
25590605-C-T 23444458-C-T P1_gr1 ***
25981030-C-A 23834883-C-A P1_Y1 ***
25565760-G-C 23419613-G-C P1_gr1 ***
25990661-A-T 23844514-A-T P1_Y1 ***
25990667-A-T 23844520-A-T P1_Y1 ***
25990672-G-T 23844525-G-T P1_Y1 ***
25994374-T-C 23848227-T-C P1_Y1 ***
22320998-T-C 20159112-T-C DYZ19 ***
25546123-C-T 23399976-C-T P1_gr1 ***
25530456-T-G 23384309-T-G P1_gr1 ***
25520509-A-G 23374362-A-G P1_gr1 ***
25862234-T-A 23716087-T-A P1_Y1 ***
26123043-A-G 23976896-A-G P1_Y1 ***
25709485-C-T 23563338-C-T P1_b3 ***
24174978-A-T 22028831-A-T P3_b1 ***
25207997-G-A 23061850-G-A P2_r1 ***
22361539-G-T 20199653-G-T DYZ19 ***
22355626-A-T 20193740-A-T DYZ19 ***
22355682-C-A 20193796-C-A DYZ19 ***
22355710-A-G 20193824-A-G DYZ19 ***
22355716-T-G 20193830-T-G DYZ19 ***
22357761-T-A 20195875-T-A DYZ19 ***
22359384-G-T 20197498-G-T DYZ19 ***
22361671-G-T 20199785-G-T DYZ19 ***
22355517-G-C 20193631-G-C DYZ19 ***
22366126-G-C 20204240-G-C DYZ19 ***
22366574-G-C 20204688-G-C DYZ19 ***
22368046-G-T 20206160-G-T DYZ19 ***
22368072-T-C 20206186-T-C DYZ19 ***
22368101-G-A 20206215-G-A DYZ19 ***
22421360-C-A 20259474-C-A DYZ19 ***
22421361-C-A 20259475-C-A DYZ19 ***
22355590-G-C 20193704-G-C DYZ19 ***
22355458-T-G 20193572-T-G DYZ19 ***
22421378-G-C 20259492-G-C DYZ19 ***
22344365-A-T 20182479-A-T DYZ19 ***
22337848-T-G 20175962-T-G DYZ19 ***
22337857-A-T 20175971-A-T DYZ19 ***
22338668-A-C 20176782-A-C DYZ19 ***
22341164-G-T 20179278-G-T DYZ19 ***
22341165-A-T 20179279-A-T DYZ19 ***
22344364-A-G 20182478-A-G DYZ19 ***
22344372-A-C 20182486-A-C DYZ19 ***
22348848-G-T 20186962-G-T DYZ19 ***
22344405-T-C 20182519-T-C DYZ19 ***
22337713-T-A 20175827-T-A DYZ19 ***
22344407-A-C 20182521-A-C DYZ19 ***
22344421-G-T 20182535-G-T DYZ19 ***
22344452-C-A 20182566-C-A DYZ19 ***
22344459-G-A 20182573-G-A DYZ19 ***
22346835-G-T 20184949-G-T DYZ19 ***
22421375-A-T 20259489-A-T DYZ19 ***
22490801-G-A 20328915-G-A DYZ19 ***
25207815-T-C 23061668-T-C P2_r1 ***
24232049-A-C 22085902-A-C P3_b1 ***
23213473-T-C 21051587-T-C ***
23415342-A-T 21253456-A-T S27761 21×T***
23517444-T-G 21355558-T-G ***
24047036-A-T 21900889-A-T ***
24123904-C-A 21977757-C-A P3_b1 ***
22337753-T-A 20175867-T-A DYZ19 ***
24339596-T-A 22193449-T-A P3_t1 ***
23181246-C-A 21019360-C-A ***
24491251-T-G 22345104-T-G ***
24650619-A-C 22504472-A-C P3_b2 ***
25031712-A-C 22885565-A-C g1 ***
25059476-G-T 22913329-G-T g1 ***
25132730-A-G 22986583-A-G g1 ***
25160282-T-A 23014135-T-A g1 ***
25207355-C-A 23061208-C-A g1 ***
26736820-G-T 24590673-G-T P1_g2 ***
22337417-T-C 20175531-T-C DYZ19 ***
22499755-G-A 20337869-G-A DYZ19 ***
22499967-G-T 20338081-G-T DYZ19 ***
22499804-G-T 20337918-G-T DYZ19 ***
22499880-G-A 20337994-G-A DYZ19 ***
22499902-T-A 20338016-T-A DYZ19 ***
22499903-T-C 20338017-T-C DYZ19 ***
22499908-G-A 20338022-G-A DYZ19 ***
22499915-C-A 20338029-C-A DYZ19 ***
22499945-A-T 20338059-A-T DYZ19 ***
22337705-A-G 20175819-A-G DYZ19 ***
23102661-G-A 20940775-G-A ***
22499970-T-C 20338084-T-C DYZ19 ***
22499973-C-T 20338087-C-T DYZ19 ***
22499975-A-G 20338089-A-G DYZ19 ***
22337428-C-A 20175542-C-A DYZ19 ***
22337419-T-G 20175533-T-G DYZ19 ***
22975213-T-C 20813327-T-C ***
23076575-A-G 20914689-A-G ***
26593574-C-A 24447427-C-A P1_g2 ***
22502323-A-T 20340437-A-T DYZ19 ***
26760509-C-A 24614362-C-A P1_g2 ***
19513143-CTTT-C 17401263-CTTT-C 20×T***
17109091-A-AAC 14997211-A-AAC 25×AC***
17389835-GA-G 15277955-GA-G ***
18255887-GTA-G 16144007-GTA-G ***
18468353-G-GA 16356473-G-GA P6_Dst 13×A***
19014997-CA-TG 16903117-CA-TG ***
19015017-GAAA-AAAG 16903137-GAAA-AAAG ***
19853737-TGC-AGA 17741857-TGC-AGA P5_Prx ***
16381232-CAAG-AAAA 14269352-CAAG-AAAA ***
20654981-AATAT-A 18493095-AATAT-A P4_Prx 21×AT***
21419116-CAATGAAACTA-TAATCAAATTC 19257230-CAATGAAACTA-TAATCAAATTC ***
21419143-AACTC-TACTT 19257257-AACTC-TACTT ***
21464813-C-CTTCTTCT 19302927-C-CTTCTTCT ***
21464820-T-TTCTTCC 19302934-T-TTCTTCC ***
21944585-CC-TG 19782699-CC-TG ***
22023684-GTTTTT-G 19861798-GTTTTT-G 17×T***
17067482-TG-CA 14955602-TG-CA ***
16381203-CAGG-GAGC 14269323-CAGG-GAGC ***
22232121-ATGAA-TTGAT 20070235-ATGAA-TTGAT DYZ19 ***
13599248-A-TG 11443572-A-TG ***
13433420-GT-TC 11277744-GT-TC ***
13433434-AG-GA 11277758-AG-GA ***
13446527-CTCCATTCCATTCCATTCCATTCCATTCCAT-C 11290851-CTCCATTCCATTCCATTCCATTCCATTCCAT-C 16×TCCAT***
13453318-GCATTCCATTC-G 11297642-GCATTCCATTC-G 12×CATTC***
13461130-ATAGGT-GTTGGC 11305454-ATAGGT-GTTGGC ***
13489515-GCCTA-ACCTT 11333839-GCCTA-ACCTT ***
13599229-GAA-G 11443553-GAA-G ***
13661294-T-TGGAAA 11505618-T-TGGAAA ***
15557033-CAAA-C 13445153-CAAA-C 18×A***
13661299-T-TGGAAA 11505623-T-TGGAAA ***
13661309-T-TGGAAA 11505633-T-TGGAAA ***
14496300-G-GATGGATGA 12384505-G-GATGGATGA ***
14610892-C-CATAG 12499098-C-CATAG ***
14661512-CCCAA-GCCAC 12549577-CCCAA-GCCAC ***
14661535-AT-CA 12549600-AT-CA ***
15173674-TG-CT 13061760-TG-CT ***
22232108-GTTC-ATTG 20070222-GTTC-ATTG DYZ19 ***
22232231-GAAA-CAAG 20070345-GAAA-CAAG DYZ19 ***
13349093-TGT-CGC 11193417-TGT-CGC ***
26713661-TG-T 24567514-TG-T P1_g2 ***
25200845-GACAAAGAAAGAA-G 23054698-GACAAAGAAAGAA-G g1 ***
25444422-T-TATTTA 23298275-T-TATTTA P2_r2 ***
25444426-TTTTTTTTTTTTT-ATTTATTTATTTA 23298279-TTTTTTTTTTTTT-ATTTATTTATTTA P2_r2 ***
25444455-CT-GA 23298308-CT-GA P2_r2 ***
25593509-CTTTT-C 23447362-CTTTT-C P1_gr1 18×T***
26101362-CAAA-C 23955215-CAAA-C P1_Y1 17×A***
26170467-AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAG-A 24024320-AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAG-A P1_Y1 ***
27484258-A-ATCTTTCTT 25338111-A-ATCTTTCTT P1_Y2 19×TCTT***
24446840-TA-T 22300693-TA-T 13×A***
27838015-AGT-GGA 25691868-AGT-GGA P1_Y2 ***
28819254-CGAAT-TGAAG 26673107-CGAAT-TGAAG ***
58837500-TCCATTCCATA-T 56753351-GATGGAATGGT-G ***
58848262-CTCTA-C 56742601-CAGAT-C ***
58881606-CCC-AGA 56709263-GGG-TCT ***
58890362-ATGC-GTGT 56700506-GCAT-ACAC ***
58974665-T-TGATTCCCTTTCATTTGATTCCATTCCATTAGTTTGCATTCCATTC 56828518-T-TGATTCCCTTTCATTTGATTCCATTCCATTAGTTTGCATTCCATTC ***
24446852-A-AAAATAT 22300705-A-AAAATAT 15×AT***
24283294-GC-AA 22137147-GC-AA P3_t1 ***
22232256-CAC-TAG 20070370-CAC-TAG DYZ19 ***
22344372-AC-CG 20182486-AC-CG DYZ19 ***
22232295-TGG-CGC 20070409-TGG-CGC DYZ19 ***
22293338-TAAATT-GAAAGA 20131452-TAAATT-GAAAGA DYZ19 ***
22308465-TGGTGA-CAGTGG 20146579-TGGTGA-CAGTGG DYZ19 ***
22308490-AGT-TGG 20146604-AGT-TGG DYZ19 ***
22311256-CAAT-GACC 20149370-CAAT-GACC DYZ19 ***
22337417-TTT-CTG 20175531-TTT-CTG DYZ19 ***
22344364-AA-GT 20182478-AA-GT DYZ19 ***
22344405-TCA-CCC 20182519-TCA-CCC DYZ19 ***
23825752-TCAA-T 21663866-TCAA-T ***
22344421-GCTGC-TCTGT 20182535-GCTGC-TCTGT DYZ19 ***
22346809-ACC-TAT 20184923-ACC-TAT DYZ19 ***
22435746-AAG-CAGA 20273860-AAG-CAGA DYZ19 ***
22490030-CT-AG 20328144-CT-AG DYZ19 ***
22499801-ATTG-GTTT 20337915-ATTG-GTTT DYZ19 ***
22499902-TT-AC 20338016-TT-AC DYZ19 ***
22852068-TGTG-CATA 20690182-TGTG-CATA ***
13414797-AT-A 11259121-AT-A 20×T***
9885623-AAAC-GAAT 10048014-AAAC-GAAT ***
26906632-T-A 24760485-T-A P1_r3 ***
28017398-G-T 25871251-G-T P1_Y2 ***
22308417-C-T 20146531-C-T DYZ19 ***
27838010-T-G 25691863-T-G P1_Y2 ***
27907259-G-T 25761112-G-T P1_Y2 ***
27916126-C-A 25769979-C-A P1_Y2 ***
27916182-C-A 25770035-C-A P1_Y2 ***
28007970-G-A 25861823-G-A P1_Y2 ***
28114921-A-T 25968774-A-T P1_b4 ***
27760153-T-C 25614006-T-C P1_Y2 ***
28225926-C-T 26079779-C-T P1_b4 ***
28311690-A-T 26165543-A-T P1_b4 ***
28356055-T-G 26209908-T-G P1_gr2 ***
28442538-C-A 26296391-C-A P1_gr2 ***
28442556-C-A 26296409-C-A P1_gr2 16×A***
28458056-G-T 26311909-G-T ***
28507658-C-A 26361511-C-A ***
27813321-C-A 25667174-C-A P1_Y2 ***
27713947-G-C 25567800-G-C P1_Y2 ***
28694157-T-C 26548010-T-C ***
27424386-C-A 25278239-C-A P1_g3 ***
26906676-C-A 24760529-C-A P1_r3 ***
26922624-A-G 24776477-A-G P1_r3 ***
26927952-C-A 24781805-C-A P1_r3 ***
27054761-C-T 24908614-C-T P1_r4 ***
27235180-T-C 25089033-T-C P1_g3 ***
27275502-G-C 25129355-G-C P1_g3 ***
27387361-G-A 25241214-G-A P1_g3 ***
27454802-G-T 25308655-G-T P1_Y2 ***
27627026-G-T 25480879-G-T P1_Y2 ***
27499032-G-T 25352885-G-T P1_Y2 ***
27499209-A-G 25353062-A-G P1_Y2 ***
27499273-A-C 25353126-A-C P1_Y2 ***
27561519-G-A 25415372-G-A P1_Y2 ***
27585813-C-T 25439666-C-T P1_Y2 ***
27586248-C-A 25440101-C-A P1_Y2 ***
27595301-G-T 25449154-G-T P1_Y2 ***
28602311-G-T 26456164-G-T ***
58836974-T-C 56753897-A-G ***
9885558-TAG-GAGTT 10047949-TAG-GAGTT ***
4277201-CTT-C 4409160-CTT-C 20×T***
28500806-C-CT 26354659-C-CT 18×T***
3079561-TA-T 3211520-TA-T 18×A***
21211281-TA-T 19049395-TA-T 13×A***
17527426-ATATG-A 15415546-ATATG-A ***
2674962-TCTC-CATA 2806921-TCTC-CATA ***
3635418-GGC-AGG 3767377-GGC-AGG ***
3754543-C-CA 3886502-C-CA ***
5211296-CTTTTTT-C 5343255-CTTTTTT-C 16×T***
3511856-C-CT 3643815-C-CT 15×T***
5260410-CA-C 5392369-CA-C 20×A***
5792830-G-GT 5924789-G-GT ***
5936159-G-GATATAT 6068118-G-GATATAT 19×AT***
6468926-TAAAA-T 6600885-TAAAA-T 28×A***
6493953-CAAAAA-C 6625912-CAAAAA-C 19×A***
8125012-G-GAAAA 8256971-G-GAAAA ***
9639183-C-CTT 9801574-C-CTT IR3_Prx 12×T***
28611412-C-CA 26465265-C-CA 15×A***
22617232-GT-G 20455346-GT-G 15×T***
58837756-G-C 56753115-C-G ***
58869695-G-C 56721176-C-G ***
58837873-A-C 56752998-T-G ***
58838929-A-C 56751942-T-G ***
58841293-C-T 56749578-G-A ***
58843351-A-C 56747520-T-G ***
58847997-T-C 56742874-A-G ***
58865589-G-A 56725282-C-T ***
58869637-A-T 56721234-T-A ***
58870178-T-C 56720693-A-G ***
9789316-GTGTA-G 9951707-GTGTA-G ***
58870180-T-G 56720691-A-C ***
58876430-C-G 56714441-G-C ***
58887558-T-C 56703313-A-G ***
58893784-T-G 56697087-A-C ***
58911188-C-T 56679683-G-A ***
58912869-A-G 56678002-T-C ***
58987763-T-C 56841616-T-C ***
22308465-T-C 20146579-T-C DYZ19 ***
21419147-C-T 19257261-C-T ***
22295066-G-T 20133180-G-T DYZ19 ***
25079750-G-A 22933603-G-A g1 ***
58914028-G-A 56676843-C-T ***
15186848-G-A 13074934-G-A ***
58836838-A-G 56754033-T-C ***
22337768-C-T 20175882-C-T DYZ19 ***
58853413-G-C 56737458-C-G ***
21419120-G-C 19257234-G-C ***
58885691-C-A 56705180-G-T ***
22356872-A-G 20194986-A-G DYZ19 ***
58885697-C-T 56705174-G-A ***
22344425-C-T 20182539-C-T DYZ19 ***
18218805-G-T 16106925-G-T ***
2775004-C-A 2906963-C-A ***
2866345-C-T 2998304-C-T ***
3208431-C-A 3340390-C-A ***
3209298-G-T 3341257-G-T ***
22325190-G-C 20163304-G-C DYZ19 ***
20655016-ATATATATG-A 18493130-ATATATATG-A P4_Prx ***
3753079-C-A 3885038-C-A ***
22320991-C-T 20159105-C-T DYZ19 ***
58866884-C-G 56723987-G-C ***
22310071-T-G 20148185-T-G DYZ19 ***
20142089-C-A 18030209-C-A P5_Dst ***
22297150-T-G 20135264-T-G DYZ19 ***
22297152-T-A 20135266-T-A DYZ19 ***
22320979-T-A 20159093-T-A DYZ19 ***
22320984-A-T 20159098-A-T DYZ19 ***
22321010-C-G 20159124-C-G DYZ19 ***
22262582-T-C 20100696-T-C DYZ19 ***
58908771-T-A 56682100-A-T ***
13459320-GCAT-CCAG 11303644-GCAT-CCAG 5×CATTC***
13746612-C-T 11590936-C-T ***
19042179-CAAAA-C 16930299-CAAAA-C 17×A***
24388089-T-TAC 22241942-T-TAC ***
28461722-CT-C 26315575-CT-C 19×T***
22262581-A-C 20100695-A-C DYZ19 ***
3411686-G-A 3543645-G-A ***
4532259-C-T 4664218-C-T ***
13746596-T-A 11590920-T-A ***
9191066-T-A 9353457-T-A ***
6901913-T-A 7033872-T-A ***
7059691-C-A 7191650-C-A ***
7483069-A-T 7615028-A-T IR1_L ***
7483082-G-T 7615041-G-T IR1_L ***
7503007-T-A 7634966-T-A IR1_L ***
7536422-A-G 7668381-A-G ***
9227435-C-T 9389826-C-T ***
6521571-C-A 6653530-C-A ***
9299539-C-A 9461930-C-A ***
9322818-G-T 9485209-G-T ***
9351256-G-A 9513647-G-A ***
9408982-T-A 9571373-T-A ***
9502325-A-C 9664716-A-C ***
9538897-G-C 9701288-G-C IR3_Prx ***
9559833-A-G 9722224-A-G IR3_Prx ***
6534732-T-C 6666691-T-C ***
6173256-C-T 6305215-C-T IR3_Dst ***
4699090-A-G 4831049-A-G ***
4782425-G-T 4914384-G-T ***
4700785-A-C 4832744-A-C ***
4782395-A-G 4914354-A-G ***
4782396-G-A 4914355-G-A ***
4782405-A-G 4914364-A-G ***
4782406-C-T 4914365-C-T ***
4782411-C-T 4914370-C-T ***
4782412-A-G 4914371-A-G ***
4964768-C-A 5096727-C-A ***
5587108-A-C 5719067-A-C ***
4964775-C-T 5096734-C-T ***
4964776-A-G 5096735-A-G ***
4964814-G-A 5096773-G-A ***
5080378-G-A 5212337-G-A ***
5194657-C-A 5326616-C-A ***
5204572-G-T 5336531-G-T ***
5224877-G-A 5356836-G-A ***
13746597-G-C 11590921-G-C ***
13746568-A-T 11590892-A-T ***
9607030-C-G 9769421-C-G IR3_Prx ***
22361553-A-T 20199667-A-T DYZ19 ***
6953202-TACAC-T 7085161-TACAC-T 17×AC***
8703020-T-TAC 8834979-T-TAC 11×AC***
3069109-G-A 3201068-G-A ***
22309726-G-T 20147840-G-T DYZ19 ***
22337399-G-A 20175513-G-A DYZ19 ***
17047682-GC-G 14935802-GC-G ***
22499854-G-A 20337968-G-A DYZ19 ***
58854277-C-T 56736594-G-A ***
18818389-G-GA 16706509-G-GA 17×A***
17872639-CTT-C 15760759-CTT-C 17×T***
22309956-T-G 20148070-T-G DYZ19 ***
4196934-CA-C 4328893-CA-C 16×A***
8218120-CTTCTTTCT-C 8350079-CTTCTTTCT-C 15×TTCT***
3550569-CAACT-C 3682528-CAACT-C ***
3571635-C-CT 3703594-C-CT ***
17946635-CTTT-C 15834755-CTTT-C 20×T***
20489565-T-A 18327679-T-A P5_Dst ***
9930123-C-A 10092514-C-A ***
21555238-C-CT 19393352-C-CT 15×T***
27127741-CTCTTTCTTTCTT-C 24981594-CTCTTTCTTTCTT-C P1_g3 15×TCTT***
22337792-C-T 20175906-C-T DYZ19 ***
13489644-G-A 11333968-G-A ***
22357674-G-T 20195788-G-T A4176 DYZ19 ***
22361657-C-A 20199771-C-A DYZ19 ***
8379144-CTTCTTTCTTTCT-C 8511103-CTTCTTTCTTTCT-C 15×TTCT***
59004627-A-G 56858480-A-G ***
13601982-AAC-A 11446306-AAC-A 14×AC***
22308466-G-A 20146580-G-A DYZ19 ***
22232108-G-A 20070222-G-A DYZ19 ***
22337444-A-G 20175558-A-G DYZ19 ***
5426365-CT-C 5558324-CT-C 16×T***
22232111-C-G 20070225-C-G DYZ19 ***
58820332-CATTCA-C 56770529-GGAATT-G ***
5650593-AAC-A 5782552-AAC-A 18×AC***
27791831-T-TTTC 25645684-T-TTTC P1_Y2 22×TTC***
9930111-G-T 10092502-G-T ***
13261921-G-T 11106245-G-T ***
27078013-GAC-G 24931866-GAC-G P1_r4 24×AC***
13375642-G-A 11219966-G-A ***
13433434-A-G 11277758-A-G ***
13433435-G-A 11277759-G-A ***
19085357-C-T 16973477-C-T ***
28628484-T-TTA 26482337-T-TTA 11×TA***
27971678-T-A 25825531-T-A P1_Y2 ***
13489372-G-A 11333696-G-A ***
13746469-G-T 11590793-G-T ***
4292046-A-C 4424005-A-C ***
22297154-A-T 20135268-A-T DYZ19 ***
22297193-A-T 20135307-A-T DYZ19 ***
22309563-T-A 20147677-T-A DYZ19 ***
22360838-C-T 20198952-C-T DYZ19 ***
24283310-T-G 22137163-T-G P3_t1 ***
13746612-CTCG-TTCC 11590936-CTCG-TTCC ***
22297150-TTTCA-GTACT 20135264-TTTCA-GTACT DYZ19 ***
13260984-T-A 11105308-T-A ***
22490843-C-T 20328957-C-T DYZ19 ***
13451191-T-TC 11295515-T-TC ***
13460967-G-A 11305291-G-A ***
13599263-G-A 11443587-G-A ***
17081268-AAT-A 14969388-AAT-A 9×AT***
20815408-CAT-C 18653522-CAT-C P4_Gap 22×AT***
25995492-GTA-G 23849345-GTA-G P1_Y1 24×TA***
28577945-CATTAT-C 26431798-CATTAT-C ***
59033312-T-G 56887165-T-G ***
14727319-AT-A 12615387-AT-A 23×T***
58865539-T-A 56725332-A-T ***
22499801-A-G 20337915-A-G DYZ19 ***
22223385-T-C 20061499-T-C DYZ19 ***
22344373-C-G 20182487-C-G DYZ19 ***
22355477-G-T 20193591-G-T DYZ19 ***
22355601-G-C 20193715-G-C DYZ19 ***
22457317-A-AT 20295431-A-AT DYZ19 ***
25466410-T-G 23320263-T-G P2_r2 ***
15072597-CT-C 12960687-CT-C ***
9591278-A-G 9753669-A-G IR3_Prx ***
9663780-C-A 9826171-C-A IR3_Prx ***
22287132-G-A 20125246-G-A DYZ19 ***
20243812-G-A 18081926-G-A P5_Dst ***
19815975-A-T 17704095-A-T P5_Prx ***
19816889-G-A 17705009-G-A P5_Prx ***
19845961-A-T 17734081-A-T P5_Prx ***
19846049-A-T 17734169-A-T P5_Prx ***
19879017-G-A 17767137-G-A P5_Prx ***
20084655-G-T 17972775-G-T P5_Dst ***
20333720-G-A 18171834-G-A P5_Dst ***
19754935-T-C 17643055-T-C P5_Prx ***
20333763-G-A 18171877-G-A P5_Dst ***
20424365-T-A 18262479-T-A P5_Dst ***
20434723-C-A 18272837-C-A P5_Dst ***
20639913-G-T 18478027-G-T P4_Prx ***
20639937-G-T 18478051-G-T P4_Prx ***
20645879-G-T 18483993-G-T P4_Prx ***
20658459-T-C 18496573-T-C P4_Prx ***
19802883-C-T 17691003-C-T P5_Prx ***
19745505-G-A 17633625-G-A P5_Prx ***
20736537-C-A 18574651-C-A P4_Prx ***
19014997-C-T 16903117-C-T ***
18231152-A-G 16119272-A-G ***
18346802-C-A 16234922-C-A P6_Prx ***
18352891-T-G 16241011-T-G P6_Prx ***
18475233-C-T 16363353-C-T P6_Dst ***
18522016-G-A 16410136-G-A P6_Dst ***
18818250-C-T 16706370-C-T ***
18845919-G-T 16734039-G-T ***
19014998-A-G 16903118-A-G ***
19576665-C-G 17464785-C-G P5_Prx ***
19015004-T-C 16903124-T-C ***
19015017-G-A 16903137-G-A ***
19015020-A-G 16903140-A-G ***
19015027-A-T 16903147-A-T ***
19029754-G-T 16917874-G-T ***
19342562-C-T 17230682-C-T ***
19429243-C-A 17317363-C-A ***
20676338-G-A 18514452-G-A P4_Prx ***
21026048-A-T 18864162-A-T P4_Dst ***
18041228-C-T 15929348-C-T ***
22232151-G-T 20070265-G-T DYZ19 ***
21955421-G-A 19793535-G-A ***
22223853-C-T 20061967-C-T DYZ19 ***
22232121-A-T 20070235-A-T DYZ19 ***
22232125-A-T 20070239-A-T DYZ19 ***
22232132-A-C 20070246-A-C DYZ19 ***
22232139-A-G 20070253-A-G DYZ19 ***
22232174-G-C 20070288-G-C DYZ19 ***
21955416-T-C 19793530-T-C ***
22232203-C-T 20070317-C-T DYZ19 ***
22232256-C-T 20070370-C-T DYZ19 ***
22232287-A-G 20070401-A-G DYZ19 ***
22232295-T-C 20070409-T-C DYZ19 ***
22232297-G-C 20070411-G-C DYZ19 ***
22232329-A-G 20070443-A-G DYZ19 ***
22238436-C-A 20076550-C-A DYZ19 ***
21955417-C-T 19793531-C-T ***
21944624-T-A 19782738-T-A ***
21280672-A-G 19118786-A-G ***
21419124-C-T 19257238-C-T ***
21280676-G-A 19118790-G-A ***
21280686-A-T 19118800-A-T ***
21324819-T-G 19162933-T-G ***
21325696-G-T 19163810-G-T ***
21347443-G-A 19185557-G-A ***
21419109-C-A 19257223-C-A ***
21419116-C-T 19257230-C-T ***
21419126-A-C 19257240-A-C ***
21944600-T-G 19782714-T-G ***
21419131-T-C 19257245-T-C ***
21419143-A-T 19257257-A-T ***
22232231-G-C 20070345-G-C DYZ19 ***
21511746-A-C 19349860-A-C ***
21698260-C-A 19536374-C-A ***
21794923-G-T 19633037-G-T ***
21944595-G-A 19782709-G-A ***
18080388-T-C 15968508-T-C ***
18006975-G-T 15895095-G-T P7_Gap ***
9885578-T-C 10047969-T-C ***
13737277-T-G 11581601-T-G ***
13489367-T-A 11333691-T-A ***
13599223-T-C 11443547-T-C ***
13599248-A-G 11443572-A-G ***
13599291-A-T 11443615-A-T ***
13608518-G-A 11452842-G-A ***
13645393-T-G 11489717-T-G ***
13739438-G-C 11583762-G-C ***
13474709-T-A 11319033-T-A ***
14128340-A-G 12007634-A-G ***
14128607-A-G 12007901-A-G ***
14181196-T-C 12060490-T-C ***
14204178-C-A 12083472-C-A ***
14232911-A-C 12112205-A-C ***
14232916-C-T 12112210-C-T ***
14377695-G-T 12256991-G-T ***
13489360-T-A 11333684-T-A ***
13469954-G-A 11314278-G-A ***
14515401-C-A 12403602-C-A ***
13223153-G-A 11067477-G-A ***
9885623-A-G 10048014-A-G ***
9885626-C-T 10048017-C-T ***
9971282-A-C 10133673-A-C ***
10058971-A-C 10221362-A-C ***
13125249-A-T 10614735-A-T ***
13205429-C-A 11049753-C-A ***
13205435-C-T 11049759-C-T ***
13252610-G-A 11096934-G-A ***
13461120-C-G 11305444-C-G ***
13254137-A-C 11098461-A-C ***
13306332-T-C 11150656-T-C ***
13306334-G-T 11150658-G-T ***
13324463-G-A 11168787-G-A ***
13353539-G-A 11197863-G-A ***
13362780-A-T 11207104-A-T ***
13427461-G-T 11271785-G-T ***
14514476-A-G 12402681-A-G ***
14661493-A-T 12549558-A-T ***
17520069-C-T 15408189-C-T ***
16381241-C-G 14269361-C-G ***
16356483-G-T 14244603-G-T 10×A***
16381203-C-G 14269323-C-G ***
16381206-G-C 14269326-G-C ***
16381217-A-C 14269337-A-C ***
16381232-C-A 14269352-C-A ***
16381235-G-A 14269355-G-A ***
16665431-G-T 14553551-G-T ***
16135452-A-G 14023572-A-G P8_Dst ***
16978731-T-A 14866851-T-A ***
16978740-G-A 14866860-G-A ***
17027416-T-C 14915536-T-C ***
17035441-T-C 14923561-T-C ***
17059687-T-C 14947807-T-C ***
17067483-G-A 14955603-G-A ***
17067577-T-A 14955697-T-A ***
16326526-A-T 14214646-A-T ***
16096138-A-T 13984258-A-T ***
14661503-G-T 12549568-G-T ***
15173666-G-C 13061752-G-C ***
14661546-A-G 12549611-A-G ***
14661561-T-C 12549626-T-C ***
14668495-C-A 12556561-C-A ***
14912102-C-T 12800169-C-T ***
15093723-G-T 12981811-G-T ***
15142252-T-C 13030339-T-C ***
15168627-C-T 13056713-C-T ***
15173686-A-G 13061772-A-G ***
15936334-T-A 13824454-T-A ***
15291249-G-T 13179348-G-T ***
15450286-G-T 13338406-G-T ***
15597647-A-G 13485767-A-G ***
15597811-T-A 13485931-T-A ***
15626925-C-G 13515045-C-G ***
15636705-G-A 13524825-G-A ***
15855662-A-C 13743782-A-C ***
58986201-CACAT-AACCC 56840054-CACAT-AACCC ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: AUPEW*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs85
Variant counts last updated 2017-09-19 23:23:37.

* BED data not available. Using default values.


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