Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > FGC4077 > FGC12948 > FGC12950 > A2182

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
S4C39
8185668-CT-C 8317627-CT-C FGC12951 +
23274603-T-A 21112717-T-A FGC12949 YY+
14436676-C-T 12315949-C-T FGC12944 Y+
17734836-A-G 15622956-A-G FGC12945 Y+
13313721-C-G 11158045-C-G FGC12942 +
8193510-G-C 8325469-G-C FGC12938 YY+
9156869-G-A 9319260-G-A FGC12940 +
21655482-T-C 19493596-T-C FGC12947 YY+
18969348-T-G 16857468-T-G FGC12946 Y+
4463002-C-T 4594961-C-T FGC12936 +
13652878-C-A 11497202-C-A FGC12943 +
8214408-G-A 8346367-G-A FGC12939 YY*
5767662-G-T 5899621-G-T FGC12937 *
13241794-G-A 11086118-G-A FGC12941 *
19029607-A-T 16917727-A-T **
14410374-A-G 12289671-A-G **
13251630-T-C 11095954-T-C **
15924414-G-T 13812534-G-T **
15671815-G-A 13559935-G-A **
4474309-G-T 4606268-G-T **
13469318-G-C 11313642-G-C **
7968397-G-A 8100356-G-A **
7671307-TACAC-T 7803266-TACAC-T 17×AC**
9075188-CTTTTTTT-C 9237579-CTTTTTTT-C 20×T**
3015575-TAC-T 3147534-TAC-T 17×AC**
13329179-G-T 11173503-G-T **
13492264-C-A 11336588-C-A **
13492247-A-T 11336571-A-T **
13517368-GACT-G 11361692-GACT-G **
5535149-CTA-C 5667108-CTA-C 10×TA**
58862644-C-G 56728227-G-C **
13476167-G-A 11320491-G-A **
14343140-T-A 12222435-T-A **
24387101-T-C 22240954-T-C **
24387102-A-C 22240955-A-C **
58990876-G-A 56844729-G-A **
13473447-C-A 11317771-C-A **
13383436-A-C 11227760-A-C **
22516115-G-A 20354229-G-A **
22789552-G-T 20627666-G-T **
17928143-T-A 15816263-T-A **
58893222-GTCCATTCCGTTCGAT-G 56697615-GGGAATCGAACGGAAT-G **
20354926-T-C 18193040-T-C P5_Dst **
7340204-A-T 7472163-A-T **
7577693-T-C 7709652-T-C **
5303394-G-T 5435353-G-T **
7632434-T-C 7764393-T-C **
8135898-G-A 8267857-G-A **
21201185-C-A 19039299-C-A **
5186392-G-A 5318351-G-A **
4395387-T-C 4527346-T-C **
58991382-T-A 56845235-T-A **
58846339-A-C 56744532-T-G ***
28751349-C-A 26605202-C-A ***
58843767-T-G 56747104-A-C ***
28751348-G-C 26605201-G-C ***
58847094-C-G 56743777-G-C ***
58843782-T-C 56747089-A-G ***
28583163-T-C 26437016-T-C ***
27581651-C-T 25435504-C-T P1_Y2 ***
58847083-T-G 56743788-A-C ***
58843783-T-A 56747088-A-T ***
28478008-A-T 26331861-A-T 15×AT***
28213287-A-G 26067140-A-G P1_b4 ***
27702244-A-G 25556097-A-G P1_Y2 ***
27733748-G-A 25587601-G-A P1_Y2 ***
58843787-T-A 56747084-A-T ***
28082509-T-A 25936362-T-A P1_Y2 ***
28082508-G-A 25936361-G-A P1_Y2 ***
58845140-T-G 56745731-A-C ***
58843764-A-G 56747107-T-C ***
28082507-T-A 25936360-T-A P1_Y2 ***
28082482-A-G 25936335-A-G P1_Y2 ***
58846261-A-T 56744610-T-A ***
28082481-A-G 25936334-A-G P1_Y2 ***
28082479-A-G 25936332-A-G P1_Y2 ***
27981718-C-A 25835571-C-A P1_Y2 ***
27637566-C-G 25491419-C-G P1_Y2 ***
27733752-G-A 25587605-G-A P1_Y2 ***
58846333-C-T 56744538-G-A ***
58832604-A-T 56758267-T-A ***
58843660-C-A 56747211-G-T ***
58832557-T-C 56758314-A-G ***
27581650-C-T 25435503-C-T P1_Y2 ***
58826823-A-T 56764048-T-A ***
58826829-C-T 56764042-G-A ***
58826831-A-T 56764040-T-A ***
58829066-T-G 56761805-A-C ***
58832554-T-A 56758317-A-T ***
58833136-G-T 56757735-C-A ***
58823533-T-C 56767338-A-G ***
58832563-C-T 56758308-G-A ***
58833134-G-A 56757737-C-T ***
58832569-A-G 56758302-T-C ***
58832575-T-A 56758296-A-T ***
58833124-A-G 56757747-T-C ***
58832602-C-T 56758269-G-A ***
58824622-T-A 56766249-A-T ***
58823035-C-T 56767836-G-A ***
58841404-C-T 56749467-G-A ***
58820475-T-A 56770396-A-T ***
58832605-T-G 56758266-A-C ***
58841334-T-C 56749537-A-G ***
58833149-A-G 56757722-T-C ***
58819791-T-G 56771080-A-C ***
58833148-G-A 56757723-C-T ***
58820472-C-T 56770399-G-A ***
58820585-G-C 56770286-C-G ***
58823033-T-A 56767838-A-T ***
58823014-T-G 56767857-A-C ***
58823018-A-G 56767853-T-C ***
58823022-C-T 56767849-G-A ***
58823024-C-T 56767847-G-A ***
58823026-C-G 56767845-G-C ***
58823031-C-A 56767840-G-T ***
58841385-T-C 56749486-A-G ***
27370023-T-C 25223876-T-C P1_g3 ***
27578917-G-A 25432770-G-A P1_Y2 ***
22499843-A-G 20337957-A-G DYZ19 ***
22450507-T-G 20288621-T-G DYZ19 ***
22491790-C-T 20329904-C-T DYZ19 ***
22495786-C-G 20333900-C-G DYZ19 ***
22495822-G-A 20333936-G-A DYZ19 ***
22496072-G-A 20334186-G-A DYZ19 ***
22499753-C-T 20337867-C-T DYZ19 ***
22499816-A-T 20337930-A-T DYZ19 ***
22499817-C-T 20337931-C-T DYZ19 ***
22503330-A-G 20341444-A-G DYZ19 ***
22424207-G-T 20262321-G-T DYZ19 ***
22504674-G-C 20342788-G-C DYZ19 ***
22984360-T-A 20822474-T-A ***
22988241-A-G 20826355-A-G ***
23205789-G-T 21043903-G-T ***
23228052-A-T 21066166-A-T ***
23228053-A-T 21066167-A-T ***
23516621-G-A 21354735-G-A ***
23518625-T-C 21356739-T-C ***
24147777-T-C 22001630-T-C P3_b1 ***
22450500-G-C 20288614-G-C DYZ19 ***
22424201-A-T 20262315-A-T DYZ19 ***
24260604-T-A 22114457-T-A P3_b1 ***
22344146-A-C 20182260-A-C DYZ19 ***
22308389-T-A 20146503-T-A DYZ19 ***
22308397-G-T 20146511-G-T DYZ19 ***
22308469-G-C 20146583-G-C DYZ19 ***
22322618-G-A 20160732-G-A DYZ19 ***
22330004-A-G 20168118-A-G DYZ19 ***
22337305-G-T 20175419-G-T DYZ19 ***
22337327-G-T 20175441-G-T DYZ19 ***
22341243-A-T 20179357-A-T DYZ19 ***
22342899-A-G 20181013-A-G DYZ19 ***
22344147-T-C 20182261-T-C DYZ19 ***
22421924-A-G 20260038-A-G DYZ19 ***
22344149-G-A 20182263-G-A YFS041871 DYZ19 ***
22360537-T-A 20198651-T-A DYZ19 ***
22361069-C-A 20199183-C-A DYZ19 ***
22364607-C-A 20202721-C-A DYZ19 ***
22365604-T-C 20203718-T-C DYZ19 ***
22365801-T-G 20203915-T-G DYZ19 ***
22366813-C-T 20204927-C-T DYZ19 ***
22367094-A-T 20205208-A-T DYZ19 ***
22369637-G-T 20207751-G-T DYZ19 ***
24260569-C-A 22114422-C-A P3_b1 ***
24260617-T-A 22114470-T-A P3_b1 ***
27578910-G-A 25432763-G-A P1_Y2 ***
27274787-T-G 25128640-T-G P1_g3 ***
26923397-G-A 24777250-G-A P1_r3 ***
27054251-C-T 24908104-C-T P1_r4 ***
27235485-C-A 25089338-C-A P1_g3 ***
27235505-C-A 25089358-C-A P1_g3 ***
27235508-T-A 25089361-T-A P1_g3 ***
27235513-C-A 25089366-C-A P1_g3 ***
27235514-T-G 25089367-T-G P1_g3 ***
27235515-T-A 25089368-T-A P1_g3 ***
27265904-G-C 25119757-G-C P1_g3 ***
27369962-T-G 25223815-T-G P1_g3 ***
26446540-A-G 24300393-A-G P1_Y1 ***
27369979-A-C 25223832-A-C P1_g3 ***
27369980-C-T 25223833-C-T P1_g3 ***
58847762-T-C 56743109-A-G ***
27409181-A-T 25263034-A-T P1_g3 ***
27409182-C-T 25263035-C-T P1_g3 ***
27409185-G-T 25263038-G-T P1_g3 ***
27476524-T-A 25330377-T-A P1_Y2 ***
27476543-A-G 25330396-A-G P1_Y2 ***
27476544-C-G 25330397-C-G P1_Y2 ***
26446798-C-T 24300651-C-T P1_Y1 ***
26446524-T-A 24300377-T-A P1_Y1 ***
24260620-A-G 22114473-A-G P3_b1 ***
26039451-T-A 23893304-T-A P1_Y1 ***
24583079-C-A 22436932-C-A P3_t2 ***
24583080-C-A 22436933-C-A P3_t2 ***
24583101-C-T 22436954-C-T P3_t2 ***
24862279-T-A 22716132-T-A P3_b2 ***
25268540-G-A 23122393-G-A P2_r1 ***
25505504-G-T 23359357-G-T P1_gr1 ***
25505516-C-T 23359369-C-T P1_gr1 ***
25593693-A-T 23447546-A-T P1_gr1 ***
26039437-C-G 23893290-C-G P1_Y1 ***
26039457-T-A 23893310-T-A P1_Y1 ***
26260543-G-A 24114396-G-A P1_Y1 ***
26039466-C-T 23893319-C-T P1_Y1 ***
26085236-C-T 23939089-C-T P1_Y1 ***
26093723-T-C 23947576-T-C P1_Y1 ***
26093735-G-A 23947588-G-A P1_Y1 ***
26093736-G-T 23947589-G-T P1_Y1 ***
26093749-C-T 23947602-C-T P1_Y1 ***
26139671-C-A 23993524-C-A P1_Y1 ***
26260530-A-C 24114383-A-C P1_Y1 ***
26260540-T-G 24114393-T-G P1_Y1 ***
58847101-A-T 56743770-T-A ***
13726203-C-G 11570527-C-G ***
58851772-T-G 56739099-A-C ***
13723596-GG-AT 11567920-GG-AT ***
13471978-GACC-CACT 11316302-GACC-CACT ***
13476136-CAAGC-TAAGA 11320460-CAAGC-TAAGA ***
13476502-GGTTG-TGTTT 11320826-GGTTG-TGTTT ***
13478509-TT-GG 11322833-TT-GG ***
13487284-CACT-GACC 11331608-CACT-GACC ***
13606877-C-CAAAAAA 11451201-C-CAAAAAA 25×A***
13701778-TGA-GGC 11546102-TGA-GGC ***
13723586-GGCAAG-TTAAAC 11567910-GGCAAG-TTAAAC ***
13740758-GAAGGAAATCA-G 11585082-GAAGGAAATCA-G ***
13424285-CCCAT-TCCAC 11268609-CCCAT-TCCAC ***
13811104-GAATGGAATGGAATGGAATGC-G 11690398-GAATGGAATGGAATGGAATGC-G ***
13838485-AGGAAT-A 11717779-AGGAAT-A 9×GGAAT***
14253254-CAA-C 12132548-CAA-C 14×A***
14986439-TAA-T 12874507-TAA-T 14×A***
15179010-C-CA 13067096-C-CA 25×A***
15263355-G-GTTAAAT ***
15947951-CTTTTTT-C 13836071-CTTTTTT-C 19×T***
16494317-AATAT-A 14382437-AATAT-A 11×AT***
17298771-G-GA 15186891-G-GA 9×A***
13467725-AA-CT 11312049-AA-CT ***
13374677-CAAAA-AAAAT 11219001-CAAAA-AAAAT ***
18124632-TAA-T 16012752-TAA-T 15×A***
7125199-C-CAA 7257158-C-CAA 16×A***
4936583-CTG-C 5068542-CTG-C 18×TG***
5107036-ACCAT-CCCAC 5238995-ACCAT-CCCAC ***
5227086-GC-AA 5359045-GC-AA ***
5308801-GAGAGAG-TATATAT 5440760-GAGAGAG-TATATAT ***
5365351-GTTTCC-CGATCT 5497310-GTTTCC-CGATCT ***
5557238-C-CA 5689197-C-CA 23×A***
6427695-T-TA 6559654-T-TA 10×A***
7076642-TAC-AAA 7208601-TAC-AAA ***
8065144-CCA-TCT 8197103-CCA-TCT ***
13254160-CTTT-TTTC 11098484-CTTT-TTTC ***
8575956-A-AT 8707915-A-AT 28×T***
9301402-TA-AG 9463793-TA-AG ***
9303733-GAGGACG-CCGATCT 9466124-GAGGACG-CCGATCT ***
9936877-CACAAA-TGCAAT 10099268-CACAAA-TGCAAT ***
9952729-ATAGCCAGTT-TTTGCCAGGC 10115120-ATAGCCAGTT-TTTGCCAGGC ***
10004740-CA-C 10167131-CA-C ***
10019063-GGGTA-TGGTG 10181454-GGGTA-TGGTG ***
13138885-GTATTCCATT-ACATTATATC 10628371-GTATTCCATT-ACATTATATC ***
13250598-GT-TC 11094922-GT-TC ***
17945431-A-AT 15833551-A-AT 10×T***
18230849-TT-GG 16118969-TT-GG ***
4104414-G-GT 4236373-G-GT 11×T***
58848553-GTCATT-G 56742312-GAATGA-G ***
58832554-TTTT-ATTC 56758314-AAAA-GAAT ***
58832563-CATTTCATTCGATTCC-TATTCCGTTCCAATCA 56758293-GGAATCGAATGAAATG-TGATTGGAACGGAATA ***
58843776-GTA-TTT 56747093-TAC-AAA ***
58847034-TCACTCTAG-CCATTGCAT 56743829-CTAGAGTGA-ATGCAATGG ***
58847060-AATT-GATG 56743808-AATT-CATC ***
58847072-CTCT-TTCC 56743796-AGAG-GGAA ***
58847087-TTCA-AATC 56743781-TGAA-GATT ***
58847190-CATTCG-GATGCC 56743676-CGAATG-GGCATC ***
58870596-CACCCA-GATCTC 56720270-TGGGTG-GAGATC ***
58823062-AATTC-GATTA 56767805-GAATT-TAATC ***
58870710-CATTC-AATTT 56720157-GAATG-AAATT ***
58870720-GATTGCA-CC 56720145-TGCAATC-GG ***
58889797-GTTTGATG-ATTAGATT 56701067-CATCAAAC-AATCTAAT ***
58898203-GCAC-CGAA 56692665-GTGC-TTCG ***
58907248-TTTATCA-CCGATCT 56683617-TGATAAA-AGATCGG ***
58908611-ATTCAAT-CTTACAC 56682254-ATTGAAT-GTGTAAG ***
58917661-NN-N ***
58995228-TAA-CAG 56849081-TAA-CAG ***
58917656-CN-C ***
58823348-ATTCA-GATC 56767519-TGAAT-GATC ***
58823046-CAATTCCA-GGATTACT 56767818-TGGAATTG-AGTAATCC ***
19052414-C-CA 16940534-C-CA 24×A***
22343913-TT-AC 20182027-TT-AC DYZ19 ***
20326007-C-CTTTCTTTT 18164121-C-CTTTCTTTT P5_Dst 29×T***
21913467-TTGACA-CGATCT 19751581-TTGACA-CGATCT ***
21994005-GCA-G 19832119-GCA-G ***
22236553-ACTCTAGAC-TCACTGGAT 20074667-ACTCTAGAC-TCACTGGAT DYZ19 ***
22252915-TGGT-ATGA 20091029-TGGT-ATGA DYZ19 ***
22256980-ACTTA-TCTTG 20095094-ACTTA-TCTTG DYZ19 ***
22337261-TCTT-ACTA 20175375-TCTT-ACTA DYZ19 ***
22337345-GT-CA 20175459-GT-CA DYZ19 ***
22366801-TTTCGTGG-GTTAATGC 20204915-TTTCGTGG-GTTAATGC DYZ19 ***
58820649-TCA-CCG 56770220-TGA-CGG ***
22580068-CT-C 20418182-CT-C 19×T***
22820355-TA-T 20658469-TA-T 12×A***
23311571-ATT-A 21149685-ATT-A 15×T***
24387101-TA-CC 22240954-TA-CC ***
25709386-G-GTTTCTT 23563239-G-GTTTCTT P1_b3 31×T***
26260540-TGCG-GGCA 24114393-TGCG-GGCA P1_Y1 ***
28549327-GC-G 26403180-GC-G ***
28549330-AAAGGGAGGGCAGGGCC-A 26403183-AAAGGGAGGGCAGGGCC-A ***
28818194-G-GTGGAATGGAATGTAA 26672047-G-GTGGAATGGAATGTAA 5×TGGAA***
4562018-G-GA 4693977-G-GA 10×A***
3902502-TAAAAATATAATACATTCAAATAGAA-T 4034461-TAAAAATATAATACATTCAAATAGAA-T ***
58851813-G-A 56739058-C-T ***
58889826-A-C 56701045-T-G ***
58879380-T-A 56711491-A-T ***
58879621-G-T 56711250-C-A ***
58879639-C-A 56711232-G-T ***
58879656-T-A 56711215-A-T ***
58880162-G-T 56710709-C-A ***
58889797-G-A 56701074-C-T ***
58889804-G-T 56701067-C-A ***
58889812-A-G 56701059-T-C ***
58889827-A-T 56701044-T-A ***
58876441-C-A 56714430-G-T ***
58889833-G-A 56701038-C-T ***
58889834-A-T 56701037-T-A ***
58889922-G-A 56700949-C-T ***
58889931-A-G 56700940-T-C ***
58890447-A-T 56700424-T-A ***
58890453-T-G 56700418-A-C ***
58890457-A-T 56700414-T-A ***
58890465-G-T 56700406-C-A ***
58890620-C-T 56700251-G-A ***
58877064-A-C 56713807-T-G ***
58876425-C-A 56714446-G-T ***
58890649-T-A 56700222-A-T ***
58857773-A-T 56733098-T-A ***
58854179-G-A 56736692-C-T ***
58856200-C-T 56734671-G-A ***
58857168-A-T 56733703-T-A ***
58857180-A-T 56733691-T-A ***
58857538-C-A 56733333-G-T ***
58857762-C-G 56733109-G-C ***
58857771-C-T 56733100-G-A ***
22282156-T-C 20120270-T-C DYZ19 ***
58857776-C-A 56733095-G-T ***
58876422-A-T 56714449-T-A ***
58857792-T-C 56733079-A-G ***
58863512-T-G 56727359-A-C ***
58870538-C-G 56720333-G-C ***
58870790-G-C 56720081-C-G ***
58872197-A-T 56718674-T-A ***
58872202-A-G 56718669-T-C ***
58872285-C-A 56718586-G-T ***
58875185-C-T 56715686-G-A ***
58876405-A-C 56714466-T-G ***
58890647-C-A 56700224-G-T ***
58898168-C-T 56692703-G-A ***
3561527-CT-TA 3693486-CT-TA ***
22127975-C-CT 19966089-C-CT 20×T***
7197570-A-AT 7329529-A-AT 19×T***
13467717-CTA-TTG 11312041-CTA-TTG ***
4998922-C-CA 5130881-C-CA 12×A***
27997643-G-GA 25851496-G-GA P1_Y2 16×A***
28710359-CA-C 26564212-CA-C 12×A***
7200820-A-AT 7332779-A-AT 15×T***
21202094-CT-C 19040208-CT-C 15×T***
21713438-TA-T 19551552-TA-T 16×A***
13466543-CC-GG 11310867-CC-GG ***
13460921-TACA-CACT 11305245-TACA-CACT ***
5252833-AT-A 5384792-AT-A 16×T***
15186597-CA-C 13074683-CA-C 14×A***
4026253-AT-A 4158212-AT-A 18×T***
4031513-C-CA 4163472-C-CA 16×A***
23425343-CA-C 21263457-CA-C 14×A***
4964910-A-AT 5096869-A-AT 15×T***
2840099-C-CAA 2972058-C-CAA 20×A***
3358526-ACCAT-CCCA 3490485-ACCAT-CCCA ***
3474540-AACCA-CAACC 3606499-AACCA-CAACC ***
6960237-TA-T 7092196-TA-T 15×A***
7362048-T-TTA 7494007-T-TTA 10×TA***
58898184-C-T 56692687-G-A ***
5502254-CA-C 5634213-CA-C 16×A***
58907248-T-C 56683623-A-G ***
58907249-T-C 56683622-A-G ***
58909851-A-C 56681020-T-G ***
58912413-C-A 56678458-G-T ***
58912427-C-T 56678444-G-A ***
58912433-C-T 56678438-G-A ***
58913120-T-G 56677751-A-C ***
58915915-A-C 56674956-T-G ***
58915916-A-C 56674955-T-G ***
4778012-CA-C 4909971-CA-C 16×A***
13467767-CACCCA-TAACCT 11312091-CACCCA-TAACCT ***
13292229-TCC-T 11136553-TCC-T 9×C***
3587292-C-CTTT 3719251-C-CTTT 22×T***
19202953-AG-A 17091073-AG-A ***
58844027-T-TC 56746843-A-AG ***
18818389-GA-G 16706509-GA-G 17×A***
9073219-C-CT 9235610-C-CT 15×T***
59030173-GT-G 56884026-GT-G ***
28474965-C-CA 26328818-C-CA 18×A***
25200855-G-GAC 23054708-G-GAC g1 ***
22289787-T-G 20127901-T-G DYZ19 ***
20591293-T-C 18429407-T-C P5_Dst ***
22276110-A-G 20114224-A-G DYZ19 ***
16301002-GA-G 14189122-GA-G 18×A***
58987404-T-A 56841257-T-A ***
22341175-C-A 20179289-C-A DYZ19 ***
13481508-T-A 11325832-T-A ***
58917665-N-A ***
58917663-N-G ***
13601077-T-C 11445401-T-C ***
13517436-C-A 11361760-C-A ***
22337346-T-A 20175460-T-A DYZ19 ***
7417561-CT-C 7549520-CT-C 14×T***
13473607-G-A 11317931-G-A ***
22234445-A-G 20072559-A-G DYZ19 ***
22343981-T-C 20182095-T-C DYZ19 ***
22365599-G-T 20203713-G-T DYZ19 ***
26499946-G-T 24353799-G-T P1_Y1 ***
22234424-CTCT-GTCA 20072538-CTCT-GTCA DYZ19 ***
3663374-C-T 3795333-C-T ***
13253741-G-T 11098065-G-T ***
3902256-A-T 4034215-A-T PF66 ***
13467784-A-G 11312108-A-G ***
28583137-G-A 26436990-G-A ***
26180188-T-C 24034041-T-C P1_Y1 ***
22234374-C-T 20072488-C-T DYZ19 ***
24895672-T-A 22749525-T-A g1 ***
28549346-C-A 26403199-C-A ***
58840421-G-C 56750450-C-G ***
58912478-C-G 56678393-G-C ***
3628709-G-GA 3760668-G-GA 26×A***
7401140-A-AT 7533099-A-AT 14×T***
22341180-GC-CT 20179294-GC-CT DYZ19 ***
13473880-AGGAT-TGGAC 11318204-AGGAT-TGGAC ***
25505519-G-T 23359372-G-T P1_gr1 ***
58864089-T-A 56726782-A-T ***
25505521-A-T 23359374-A-T P1_gr1 ***
25505522-A-T 23359375-A-T P1_gr1 ***
25505528-G-T 23359381-G-T P1_gr1 ***
58840380-G-C 56750491-C-G ***
58870180-TG-AT 56720690-CA-AT ***
5378192-C-CA 5510151-C-CA 21×A***
9951786-G-C 10114177-G-C ***
13256715-G-A 11101039-G-A ***
10026158-C-T 10188549-C-T ***
13222836-G-A 11067160-G-A ***
22337286-G-C 20175400-G-C DYZ19 ***
3902497-A-T 4034456-A-T ***
13468540-G-C 11312864-G-C ***
13467726-A-T 11312050-A-T ***
13483817-G-A 11328141-G-A ***
13484462-G-T 11328786-G-T ***
13540842-G-A 11385166-G-A ***
3087288-C-T 3219247-C-T ***
3167207-C-A 3299166-C-A ***
3313749-A-G 3445708-A-G ***
4071051-T-G 4203010-T-G ***
5506028-C-T 5637987-C-T ***
4228689-G-T 4360648-G-T ***
4359374-A-G 4491333-A-G ***
4732060-A-G 4864019-A-G ***
4843052-A-G 4975011-A-G ***
5116330-G-T 5248289-G-T ***
5378576-G-T 5510535-G-T ***
5704071-C-A 5836030-C-A ***
5766067-C-G 5898026-C-G ***
58847514-C-G 56743357-G-C ***
58870594-G-T 56720277-C-A ***
13461596-A-C 11305920-A-C ***
27636947-C-T 25490800-C-T P1_Y2 ***
13936205-G-A 11815499-G-A 14×AAGA***
5841289-G-A 5973248-G-A ***
21482757-C-T 19320871-C-T ***
13245000-A-G 11089324-A-G ***
13618653-G-A 11462977-G-A ***
3090217-A-G 3222176-A-G ***
13346809-C-T 11191133-C-T ***
5308805-G-T 5440764-G-T ***
9930303-T-C 10092694-T-C ***
3902604-A-G 4034563-A-G ***
18067460-A-G 15955580-A-G BY12411 ***
3663380-T-C 3795339-T-C ***
27636916-G-A 25490769-G-A P1_Y2 ***
58985793-G-C 56839646-G-C ***
58990017-A-T 56843870-A-T ***
3459526-A-G 3591485-A-G ***
3612219-A-C 3744178-A-C ***
9930372-C-T 10092763-C-T ***
22365813-C-G 20203927-C-G DYZ19 ***
22337250-C-T 20175364-C-T DYZ19 ***
6194832-A-G 6326791-A-G IR3_Dst ***
22366697-T-C 20204811-T-C DYZ19 ***
13246280-G-T 11090604-G-T ***
13484485-G-C 11328809-G-C ***
13484461-T-A 11328785-T-A ***
13484476-G-A 11328800-G-A ***
22250224-G-A 20088338-G-A DYZ19 ***
22337291-C-A 20175405-C-A DYZ19 ***
22341206-T-G 20179320-T-G DYZ19 ***
22341217-G-C 20179331-G-C DYZ19 ***
22367222-G-T 20205336-G-T DYZ19 ***
9930334-CGGCT-TGGCG 10092725-CGGCT-TGGCG ***
58843820-A-C 56747051-T-G ***
58843827-G-C 56747044-C-G ***
58843829-A-C 56747042-T-G ***
58843831-A-C 56747040-T-G ***
58843833-T-G 56747038-A-C ***
8154134-CT-C 8286093-CT-C 16×T***
13378119-GC-CT 11222443-GC-CT ***
58846437-TTCCATTCAAA-T 56744416-GGAATGGATTT-G ***
14258539-CA-TG 12137833-CA-TG ***
22164547-CA-C 20002661-CA-C 19×A***
5869982-C-T 6001941-C-T 11×T***
22311623-G-T 20149737-G-T DYZ19 ***
19250664-G-GTT 17138784-G-GTT 45×T***
7461754-GT-G 7593713-GT-G IR1_L 23×T***
13467152-C-A 11311476-C-A ***
22491469-T-C 20329583-T-C DYZ19 ***
58876789-G-C 56714082-C-G 4×CATTC***
58912938-A-C 56677933-T-G ***
21482762-C-T 19320876-C-T 19×T***
58835766-GCATTC-G 56755075-AAATGG-A 5×CATTC***
58912947-C-T 56677924-G-A ***
58874574-C-G 56716297-G-C ***
22268233-G-T 20106347-G-T DYZ19 ***
19611206-C-T 17499326-C-T P5_Prx 26×T***
22232168-A-T 20070282-A-T DYZ19 ***
22232192-G-T 20070306-G-T DYZ19 ***
22353445-A-G 20191559-A-G DYZ19 ***
58841320-C-T 56749551-G-A ***
58843619-C-G 56747252-G-C ***
58867576-C-G 56723295-G-C ***
6093471-G-A 6225430-G-A ***
13484493-T-A 11328817-T-A ***
22337235-G-A 20175349-G-A DYZ19 ***
20368187-A-C 18206301-A-C P5_Dst ***
20368162-A-G 18206276-A-G P5_Dst ***
20368163-T-A 18206277-T-A P5_Dst ***
20368166-C-A 18206280-C-A P5_Dst ***
20368169-T-C 18206283-T-C P5_Dst ***
20368170-G-A 18206284-G-A P5_Dst ***
20368174-G-A 18206288-G-A P5_Dst ***
20368175-G-A 18206289-G-A P5_Dst ***
20368186-T-G 18206300-T-G P5_Dst ***
20368191-A-T 18206305-A-T P5_Dst ***
20368153-T-C 18206267-T-C P5_Dst ***
20368200-A-T 18206314-A-T P5_Dst ***
22252900-C-A 20091014-C-A DYZ19 ***
22481317-C-A 20319431-C-A DYZ19 ***
22498439-T-G 20336553-T-G DYZ19 ***
58829081-T-A 56761790-A-T ***
58844918-A-T 56745953-T-A ***
13453123-TCATTC-T 11297447-TCATTC-T 14×CATTC***
22337206-C-G 20175320-C-G DYZ19 ***
20368157-C-T 18206271-C-T P5_Dst ***
20367955-G-T 18206069-G-T P5_Dst ***
13515340-G-T 11359664-G-T ***
22420975-C-G 20259089-C-G DYZ19 ***
13514085-A-G 11358409-A-G ***
13842510-T-A 11721804-T-A ***
22252915-T-A 20091029-T-A DYZ19 ***
22252918-T-A 20091032-T-A DYZ19 ***
58856239-T-C 56734632-A-G ***
21120339-TA-T 18958453-TA-T 16×A***
13460282-A-G 11304606-A-G Z18680 ***
22420952-T-C 20259066-T-C DYZ19 ***
26508288-C-G 24362141-C-G P1_Y1 ***
20367949-G-C 18206063-G-C P5_Dst ***
58843749-T-C 56747122-A-G ***
22252883-ATGA-GTGT 20090997-ATGA-GTGT DYZ19 ***
22361163-GT-AC 20199277-GT-AC DYZ19 ***
22420995-TG-AT 20259109-TG-AT DYZ19 ***
22480990-GTG-ATT 20319104-GTG-ATT DYZ19 ***
13256418-A-G 11100742-A-G ***
20367902-A-T 18206016-A-T P5_Dst ***
20367923-A-T 18206037-A-T P5_Dst ***
20367939-T-A 18206053-T-A P5_Dst ***
5837257-T-A 5969216-T-A ***
6298483-A-T 6430442-A-T IR3_Dst ***
22256876-A-T 20094990-A-T DYZ19 ***
17481418-G-A 15369538-G-A ***
15912055-C-T 13800175-C-T M12014 21×T***
16309105-C-T 14197225-C-T ***
16309107-C-T 14197227-C-T ***
16309113-C-T 14197233-C-T ***
16411070-A-G 14299190-A-G ***
16701644-A-G 14589764-A-G ***
16713525-C-T 14601645-C-T ***
16995108-A-G 14883228-A-G ***
17569254-G-A 15457374-G-A ***
15639980-A-T 13528100-A-T ***
17597744-G-A 15485864-G-A 14×A***
17885608-T-C 15773728-T-C ***
17994916-T-A 15883036-T-A P7_Prx ***
17994917-C-A 15883037-C-A P7_Prx ***
18016222-A-T 15904342-A-T P7_Dst ***
18141213-T-G 16029333-T-G ***
18141280-A-T 16029400-A-T ***
18141927-G-A 16030047-G-A ***
15853509-G-T 13741629-G-T ***
15116669-C-T 13004756-C-T ***
18456287-C-T 16344407-C-T P6_Dst ***
13726743-G-A 11571067-G-A ***
13722528-G-T 11566852-G-T ***
13723586-G-T 11567910-G-T ***
13723587-G-T 11567911-G-T ***
13723591-G-C 11567915-G-C ***
13723596-G-A 11567920-G-A ***
13725379-A-T 11569703-A-T ***
13725399-C-T 11569723-C-T ***
13726697-C-G 11571021-C-G ***
13734889-T-A 11579213-T-A ***
14630546-T-C 12518615-T-C ***
13734894-T-G 11579218-T-G ***
13734913-A-C 11579237-A-C ***
13734919-T-A 11579243-T-A ***
13734934-A-T 11579258-A-T ***
13734936-G-T 11579260-G-T ***
13740743-A-G 11585067-A-G ***
13740865-A-C 11585189-A-C ***
14097927-A-G 11977221-A-G ***
18294058-A-C 16182178-A-C P6_Prx ***
18728740-G-A 16616860-G-A ***
13716290-C-A 11560614-C-A ***
21417853-A-G 19255967-A-G ***
7484034-G-GA 7615993-G-GA IR1_L 11×A***
20725975-G-T 18564089-G-T P4_Prx ***
20725983-T-A 18564097-T-A P4_Prx ***
20725996-C-A 18564110-C-A P4_Prx ***
20775694-C-T 18613808-C-T P4_Prx ***
20775696-C-T 18613810-C-T P4_Prx ***
20775697-A-T 18613811-A-T P4_Prx ***
20793475-T-C 18631589-T-C P4_Prx ***
21676853-A-G 19514967-A-G ***
20591286-G-C 18429400-G-C P5_Dst ***
21915473-G-A 19753587-G-A ***
22234424-C-G 20072538-C-G DYZ19 ***
22234427-T-A 20072541-T-A DYZ19 ***
22248457-G-T 20086571-G-T DYZ19 ***
22250887-G-C 20089001-G-C DYZ19 ***
22250896-T-A 20089010-T-A DYZ19 ***
22252907-C-G 20091021-C-G DYZ19 ***
22252927-C-T 20091041-C-T DYZ19 ***
20591292-T-G 18429406-T-G P5_Dst ***
20591279-A-C 18429393-A-C P5_Dst ***
19012978-G-A 16901098-G-A ***
19644390-T-A 17532510-T-A P5_Prx ***
19016764-T-G 16904884-T-G ***
19071305-T-G 16959425-T-G ***
19579887-C-A 17468007-C-A P5_Prx ***
19579893-G-A 17468013-G-A P5_Prx ***
19579894-T-A 17468014-T-A P5_Prx ***
19579906-T-A 17468026-T-A P5_Prx ***
19610119-C-T 17498239-C-T P5_Prx ***
19644389-T-A 17532509-T-A P5_Prx ***
19644393-T-A 17532513-T-A P5_Prx ***
20591277-A-C 18429391-A-C P5_Dst ***
19644395-C-A 17532515-C-A P5_Prx ***
19644398-C-A 17532518-C-A P5_Prx ***
19644401-C-T 17532521-C-T P5_Prx ***
20368176-G-A 18206290-G-A P5_Dst ***
20486995-A-T 18325109-A-T P5_Dst ***
20591266-C-T 18429380-C-T P5_Dst ***
20591272-A-C 18429386-A-C P5_Dst ***
20591273-T-C 18429387-T-C P5_Dst ***
13722523-G-A 11566847-G-A ***
13716288-G-T 11560612-G-T ***
6346100-A-G 6478059-A-G ***
13222326-A-G 11066650-A-G ***
13109091-A-G 10598577-A-G ***
13109093-A-G 10598579-A-G ***
13110228-C-A 10599714-C-A ***
13110242-C-A 10599728-C-A ***
13110261-T-G 10599747-T-G ***
13222169-A-G 11066493-A-G ***
13222177-G-A 11066501-G-A ***
13222207-A-G 11066531-A-G ***
13223569-A-G 11067893-A-G ***
13109084-A-T 10598570-A-T ***
13223697-A-C 11068021-A-C ***
13250569-T-G 11094893-T-G ***
13251387-C-A 11095711-C-A ***
13251461-C-A 11095785-C-A ***
13251978-A-T 11096302-A-T ***
13253040-C-A 11097364-C-A ***
13254522-C-A 11098846-C-A ***
13256023-C-A 11100347-C-A ***
13109087-C-G 10598573-C-G ***
13109068-T-A 10598554-T-A ***
13322814-G-A 11167138-G-A ***
9576374-G-T 9738765-G-T IR3_Prx ***
7044870-A-G 7176829-A-G ***
7343477-C-A 7475436-C-A ***
9303739-G-T 9466130-G-T ***
9330338-A-G 9492729-A-G ***
9428436-G-T 9590827-G-T ***
9541730-C-A 9704121-C-A IR3_Prx ***
9541831-G-T 9704222-G-T IR3_Prx ***
9576371-G-A 9738762-G-A IR3_Prx ***
9576375-G-C 9738766-G-C IR3_Prx ***
13109060-A-G 10598546-A-G ***
9784020-A-T 9946411-A-T ***
9930349-C-G 10092740-C-G ***
9962341-A-C 10124732-A-C ***
10034819-T-G 10197210-T-G ***
10034827-T-G 10197218-T-G ***
13107719-G-A 10597205-G-A ***
13109014-A-C 10598500-A-C ***
13109044-C-A 10598530-C-A ***
13258251-G-C 11102575-G-C ZS7857 ***
13328664-G-T 11172988-G-T ***
13716283-G-T 11560607-G-T ***
13516726-G-A 11361050-G-A ***
13479696-G-C 11324020-G-C ***
13480727-A-G 11325051-A-G ***
13480736-C-T 11325060-C-T ***
13480909-C-A 11325233-C-A ***
13481470-C-T 11325794-C-T ***
13483013-T-G 11327337-T-G ***
13484490-G-T 11328814-G-T ***
13484765-A-T 11329089-A-T ***
13517372-A-G 11361696-A-G ***
13478978-G-T 11323302-G-T ***
13562246-T-C 11406570-T-C ***
13612939-T-C 11457263-T-C ***
13703120-G-A 11547444-G-A ***
13714956-C-G 11559280-C-G ***
13714969-C-A 11559293-C-A ***
13716262-C-T 11560586-C-T ***
13716272-A-T 11560596-A-T ***
13716275-A-T 11560599-A-T ***
13479550-C-A 11323874-C-A ***
13478730-A-C 11323054-A-C ***
13329200-G-C 11173524-G-C ***
13465319-A-G 11309643-A-G ***
13407401-C-T 11251725-C-T ***
13460172-G-T 11304496-G-T ***
13460770-A-C 11305094-A-C ***
13460945-A-T 11305269-A-T ***
13461571-G-T 11305895-G-T ***
13463997-T-A 11308321-T-A ***
13464005-C-A 11308329-C-A ***
13464026-G-A 11308350-G-A ***
13465321-C-A 11309645-C-A ***
13475539-G-A 11319863-G-A ***
13465398-C-A 11309722-C-A ***
13465634-T-G 11309958-T-G ***
13465637-T-A 11309961-T-A ***
13465640-A-T 11309964-A-T ***
13467711-C-A 11312035-C-A ***
13470126-G-T 11314450-G-T ***
13473401-T-C 11317725-T-C ***
13473498-G-C 11317822-G-C ***
13473535-G-A 11317859-G-A ***
58917656-CNN-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
L21/S1451324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211
Wilson1325141111-13121212131429179-1011112515183015-16-16-17111119-231716191737-40121211915-1681010810101221-231710121216812252013121113111112123315916122426191211121211914121011113012132413101021151913241714152412241810141791211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: S4C39*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs74
Variant counts last updated 2017-09-19 23:23:03.

* BED data not available. Using default values.


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