Wahl
BigY2: 95535MDKA Birth: Germany
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 95535 |
---|---|---|---|---|---|---|---|---|
20650558-A-AT | 18488672-A-AT | P4_Prx | 17×T | A* | ||||
6308698-C-G | 6440657-C-G | IR3_Dst | A* | |||||
18374108-A-G | 16262228-A-G | P6_Prx | A* | |||||
20748528-G-A | 18586642-G-A | P4_Prx | A* | |||||
24208164-G-A | 22062017-G-A | P3_b1 | A* | |||||
25857230-C-T | 23711083-C-T | P1_Y1 | A* | |||||
25970049-A-C | 23823902-A-C | P1_Y1 | A* | |||||
28816818-G-C | 26670671-G-C | A* | ||||||
9384243-C-G | 9546634-C-G | BY64204 | Z44888 | Y | + | |||
22902251-G-GA | 20740365-G-GA | A744 | 9×A | + | ||||
9850653-T-C | 10013044-T-C | M9063 YSC0001322 PF4522 | Y | Y | + | |||
9384255-A-C | 9546646-A-C | BY64204 | FGC33853 | Y | + | |||
15275088-C-T | 13163177-C-T | Y40907 | Y | Y | + | |||
7690854-G-A | 7822813-G-A | ZS4109 | Y | Y | + | |||
22937273-G-A | 20775387-G-A | BY20676 | CTS11080 | Y | Y | + | ||
22238122-C-T | 20076236-C-T | BY213770 | DYZ19 | + | ||||
16906758-A-T | 14794878-A-T | BY79404 | A17383 | Y | Y | + | ||
2760373-ATTGT-A | 2892332-ATTGT-A | + | ||||||
6154063-A-C | 6286022-A-C | BY152403 | IR3_Dst | + | ||||
8048005-G-C | 8179964-G-C | BY152786 | Y | Y | + | |||
8272892-G-A | 8404851-G-A | BY152859 | Y | Y | + | |||
8462956-T-C | 8594915-T-C | BY152928 | Y | Y | + | |||
8752960-G-A | 8884919-G-A | BY153025 | Y | Y | + | |||
9160340-C-T | 9322731-C-T | BY153135 | + | |||||
14406887-G-T | 12286185-G-T | BY153638 | Y | Y | + | |||
15272684-T-C | 13160773-T-C | BY153840 | Y | Y | + | |||
15307578-C-T | 13195680-C-T | BY153845 | Y | Y | + | |||
15501921-T-C | 13390041-T-C | BY153885 | Y | Y | + | |||
15608735-C-T | 13496855-C-T | BY153924 | Y | Y | + | |||
15751079-A-G | 13639199-A-G | BY153962 | Y | Y | + | |||
16179119-C-T | 14067239-C-T | FGC10329 | Y | + | ||||
16565964-C-T | 14454084-C-T | BY154152 | Y | Y | + | |||
17191340-A-G | 15079460-A-G | BY154318 | Y | Y | + | |||
17197639-GC-G | 15085759-GC-G | + | ||||||
17566315-T-C | 15454435-T-C | BY154407 | Y | Y | + | |||
17913438-C-A | 15801558-C-A | BY154505 | Y | Y | + | |||
17927031-A-C | 15815151-A-C | BY154510 | Y | Y | + | |||
17949388-TA-T | 15837508-TA-T | + | ||||||
18346440-C-T | 16234560-C-T | BY154625 | P6_Prx | + | ||||
19270670-G-A | 17158790-G-A | BY154850 | Y | Y | + | |||
19513733-G-A | 17401853-G-A | Y | Y | + | ||||
21905766-G-A | 19743880-G-A | BY155160 | Y | Y | + | |||
22273027-T-C | 20111141-T-C | BY215511 | DYZ19 | + | ||||
22445325-G-T | 20283439-G-T | BY219600 | DYZ19 | + | ||||
22459806-A-C | 20297920-A-C | BY220393 | DYZ19 | + | ||||
22512361-G-A | 20350475-G-A | BY225852 | DYZ19 | + | ||||
22513571-G-C | 20351685-G-C | BY155354 | Y | + | ||||
22549703-C-T | 20387817-C-T | BY155359 | Y | Y | + | |||
23124340-T-A | 20962454-T-A | BY155519 | Y | Y | + | |||
23408959-T-A | 21247073-T-A | BY155602 | Y | Y | + | |||
23746843-T-C | 21584957-T-C | BY155679 | Y | + | ||||
23807274-C-G | 21645388-C-G | BY155696 | Y | + | ||||
19076-T-C | + | |||||||
13458441-G-GATTCC | 11302765-G-GATTCC | 7×ATTCC | * | |||||
13253396-G-GTTTT,GTTTTT | 11097720-G-GTTTT,GTTTTT | 12×T | * | |||||
7717787-T-C | 7849746-T-C | FGC31171 ZS5528 | 5×CTTC | ** | ||||
13839814-T-A | 11719108-T-A | ** | ||||||
23377534-TA-T | 21215648-TA-T | 9×A | ** | |||||
28784634-T-C | 26638487-T-C | ** | ||||||
28370015-T-TAG | 26223868-T-TAG | P1_gr2 | 16×AG | ** | ||||
14848913-C-CT | 12736979-C-CT | 14×T | ** | |||||
13394839-CGG-C | 11239163-CGG-C | 13×G | ** | |||||
22092601-C-CTTTATTTA | 19930715-C-CTTTATTTA | 12×TTTA | ** | |||||
7009185-TTC-T | 7141144-TTC-T | ** | ||||||
15262458-C-CAAA | 13150542-C-CAAA | 30×A | ** | |||||
21283207-T-TA | 19121321-T-TA | 8×A | ** | |||||
25592904-A-C | 23446757-A-C | FT461308 | P1_gr1 | ** | ||||
7018027-A-AT | 7149986-A-AT | 24×T | ** | |||||
4145833-TTC-T | 4277792-TTC-T | ** | ||||||
10051788-C-A | 10214179-C-A | ** | ||||||
13457680-C-G | 11302004-C-G | ** | ||||||
28617703-T-G | 26471556-T-G | ** | ||||||
58984651-G-T | 56838504-G-T | ** | ||||||
9519814-T-C | 9682205-T-C | BY42829 | ** | |||||
13486589-C-T | 11330913-C-T | ** | ||||||
13803293-G-T | 11682587-G-T | ** | ||||||
18794908-T-TA | 16683028-T-TA | 10×A | ** | |||||
5273214-C-CT | 5405173-C-CT | 23×T | ** | |||||
18636612-CTTT-C | 16524732-CTTT-C | 17×T | ** | |||||
13474498-C-G | 11318822-C-G | ** | ||||||
21078733-G-T | 18916847-G-T | ** | ||||||
21599252-G-GA | 19437366-G-GA | 11×A | ** | |||||
9956364-T-TA | 10118755-T-TA | 16×A | ** | |||||
13486640-T-A | 11330964-T-A | ** | ||||||
10973966-CCACT-C | ** | |||||||
13705506-G-T | 11549830-G-T | ** | ||||||
10889775-C-CTCTTGGGTGG | ** | |||||||
10889794-C-G | ** | |||||||
10889798-T-C | ** | |||||||
10893951-T-C | BY83960 | ** | ||||||
10893952-C-A | BY83961 | ** | ||||||
19600474-G-T | 17488594-G-T | P5_Prx | ** | |||||
56843062-G-A | ** | |||||||
10986389-C-T | ** | |||||||
10986393-C-G | ** | |||||||
28758232-C-A | 26612085-C-A | ** | ||||||
10799597-T-C | ** | |||||||
11012292-C-G | ** | |||||||
20424872-G-T | 18262986-G-T | P5_Dst | ** | |||||
10814463-T-TATTCC | ** | |||||||
10958503-T-TTCTAA | ** | |||||||
13474476-G-A | 11318800-G-A | ** | ||||||
13474503-G-A | 11318827-G-A | ** | ||||||
13474509-T-G | 11318833-T-G | ** | ||||||
13474511-A-T | 11318835-A-T | ** | ||||||
13474529-G-C | 11318853-G-C | ** | ||||||
15242602-C-A | 13130688-C-A | ** | ||||||
10896380-C-T | ** | |||||||
13486627-A-C | 11330951-A-C | ** | ||||||
13486628-A-T | 11330952-A-T | ** | ||||||
13486638-A-T | 11330962-A-T | ** | ||||||
23435682-CTTTTTT-C | 21273796-CTTTTTT-C | 21×T | ** | |||||
11015192-T-C | ** | |||||||
11012310-T-C | ** | |||||||
11012311-T-A | ** | |||||||
10882027-G-C | ** | |||||||
11033936-T-C | ** | |||||||
6374130-G-T | 6506089-G-T | ** | ||||||
18346526-C-A | 16234646-C-A | P6_Prx | ** | |||||
15500616-C-A | 13388736-C-A | ** | ||||||
10795020-A-G | ** | |||||||
10927236-T-G | ** | |||||||
10927238-C-A | ** | |||||||
10927253-C-A | ** | |||||||
20579119-CAT-C | 18417233-CAT-C | P5_Dst | ** | |||||
10801687-C-T | ** | |||||||
10797907-T-C | ** | |||||||
10693442-ATTCT-A | ** | |||||||
11022022-A-T | ** | |||||||
11022031-C-A | ** | |||||||
11022038-T-C | ** | |||||||
11022060-C-T | ** | |||||||
11022072-ACTCCT-A | ** | |||||||
10825252-T-G | ** | |||||||
19600525-G-T | 17488645-G-T | P5_Prx | ** | |||||
10927846-C-T | ** | |||||||
10655078-C-A | ** | |||||||
10655086-T-C | ** | |||||||
10655092-T-C | ** | |||||||
11034824-C-A | ** | |||||||
11034835-A-T | ** | |||||||
11034909-G-C | ** | |||||||
11034915-C-T | ** | |||||||
11034921-C-G | ** | |||||||
4101096-C-A | 4233055-C-A | ** | ||||||
19476468-C-A | 17364588-C-A | ** | ||||||
10882030-C-T | ** | |||||||
9952215-C-A | 10114606-C-A | ** | ||||||
23204441-C-A | 21042555-C-A | FT11103 | ** | |||||
4243010-C-A | 4374969-C-A | ** | ||||||
10760009-C-A | ** | |||||||
10825245-C-T | ** | |||||||
10767868-T-A | ** | |||||||
10767890-A-ACTCTC | ** | |||||||
10767905-T-TCAC | ** | |||||||
10767907-A-ACT | ** | |||||||
10767924-T-A | ** | |||||||
7235830-TG-T | 7367789-TG-T | ** | ||||||
10907654-C-A | ** | |||||||
7172494-G-T | 7304453-G-T | ** | ||||||
13474449-G-A | 11318773-G-A | ** | ||||||
13474451-G-T | 11318775-G-T | ** | ||||||
5869982-CTT-C | 6001941-CTT-C | 11×T | ** | |||||
13811116-A-G | 11690410-A-G | ** | ||||||
16062182-C-A | 13950302-C-A | ** | ||||||
10889785-C-A | ** | |||||||
7396388-C-A | 7528347-C-A | ** | ||||||
23786415-C-A | 21624529-C-A | ** | ||||||
11020145-C-G | ** | |||||||
13457696-C-T | 11302020-C-T | ** | ||||||
13457700-C-G | 11302024-C-G | ** | ||||||
24631265-TG-T | 22485118-TG-T | P3_t2 | ** | |||||
10997705-T-A | ** | |||||||
9436804-C-A | 9599195-C-A | ** | ||||||
10929189-C-A | ** | |||||||
9799134-CAAAAAAA-C | 9961525-CAAAAAAA-C | 24×A | ** | |||||
10801674-T-C | ** | |||||||
22080545-C-A | 19918659-C-A | ** | ||||||
18858548-A-G | 16746668-A-G | ** | ||||||
10992285-C-A | ** | |||||||
11023009-T-C | ** | |||||||
10786433-T-C | ** | |||||||
10882062-T-C | ** | |||||||
10889778-T-C | ** | |||||||
10658611-T-A | ** | |||||||
6911241-C-A | 7043200-C-A | ** | ||||||
10757005-A-C | ** | |||||||
10796690-T-A | ** | |||||||
10929151-T-TA | ** | |||||||
10929173-T-A | ** | |||||||
10929175-TCTGCTGC-T | ** | |||||||
6751577-C-A | 6883536-C-A | ** | ||||||
8076856-T-A | 8208815-T-A | ** | ||||||
11031360-C-A | ** | |||||||
10756995-G-C | ** | |||||||
16739069-GAA-G | 14627189-GAA-G | 17×A | ** | |||||
16868631-G-GTA | 14756751-G-GTA | ** | ||||||
24631267-TG-T | 22485120-TG-T | P3_t2 | ** | |||||
17622750-C-A | 15510870-C-A | FTB37304 | ** | |||||
10801647-G-C | ** | |||||||
15899064-TAA-T | 13787184-TAA-T | 11×A | ** | |||||
21412261-CTT-C | 19250375-CTT-C | 36×T | ** | |||||
10748706-T-C | ** | |||||||
10691087-G-A | ** | |||||||
10691109-C-CTTCAG | ** | |||||||
5011422-C-A | 5143381-C-A | ** | ||||||
27894290-A-T | 25748143-A-T | P1_Y2 | ** | |||||
18210270-ATTTTTT-A | 16098390-ATTTTTT-A | 18×T | ** | |||||
10929726-C-A | ** | |||||||
14846833-A-G | 12734899-A-G | ** | ||||||
14180896-C-A | 12060190-C-A | ** | ||||||
22204383-G-T | 20042497-G-T | ** | ||||||
10964689-C-T | FT255317 | ** | ||||||
10748669-TTCCAC-T | ** | |||||||
10748698-G-T | ** | |||||||
10748699-C-T | ** | |||||||
10748713-GTTCTTTTCCA-G | ** | |||||||
18188051-C-A | 16076171-C-A | ** | ||||||
13839810-G-A | 11719104-G-A | ** | ||||||
19682174-CAA-C | 17570294-CAA-C | P5_Prx | 30×A | ** | ||||
10786457-A-G | ** | |||||||
10786458-T-G | ** | |||||||
10786462-A-C | ** | |||||||
10992286-C-G | ** | |||||||
10992303-T-G | ** | |||||||
10927854-C-T | ** | |||||||
19252995-G-T | 17141115-G-T | ** | ||||||
7256115-G-T | 7388074-G-T | ** | ||||||
4527412-C-A | 4659371-C-A | ** | ||||||
4087908-C-A | 4219867-C-A | ** | ||||||
13989068-C-A | 11868362-C-A | ** | ||||||
10928846-C-T | ** | |||||||
23435711-A-G | 21273825-A-G | ** | ||||||
15268881-C-A | 13156970-C-A | ** | ||||||
23838883-C-A | 21676997-C-A | ** | ||||||
17703309-T-G | 15591429-T-G | ** | ||||||
10887127-G-T | ** | |||||||
10748651-T-C | ** | |||||||
9956464-C-A | 10118855-C-A | ** | ||||||
9321740-C-T | 9484131-C-T | ** | ||||||
13457691-C-A | 11302015-C-A | ** | ||||||
14366695-C-A | 12245990-C-A | ** | ||||||
56843007-G-T | ** | |||||||
2845821-CAAAA-C | 2977780-CAAAA-C | 28×A | ** | |||||
15696939-A-C | 13585059-A-C | ** | ||||||
7196248-C-A | 7328207-C-A | ** | ||||||
20733589-C-A | 18571703-C-A | P4_Prx | ** | |||||
21545376-T-C | 19383490-T-C | ** | ||||||
24305273-A-AC | 22159126-A-AC | P3_t1 | ** | |||||
21299354-C-T | 19137468-C-T | ** | ||||||
22067573-C-A | 19905687-C-A | ** | ||||||
5613329-C-A | 5745288-C-A | ** | ||||||
21394844-C-A | 19232958-C-A | ** | ||||||
10964694-T-C | ** | |||||||
11026037-C-A | ** | |||||||
13209647-G-A | 11053971-G-A | BY163447 | ** | |||||
7197326-C-A | 7329285-C-A | ** | ||||||
10997718-C-CT | ** | |||||||
4931960-G-T | 5063919-G-T | ** | ||||||
22993426-C-A | 20831540-C-A | ** | ||||||
11033937-G-A | ** | |||||||
10824436-C-A | ** | |||||||
10889299-A-T | ** | |||||||
10927896-T-C | ** | |||||||
18423905-G-A | 16312025-G-A | P6_Gap | ** | |||||
10795096-C-T | ** | |||||||
10869039-ATTCCAT-A | ** | |||||||
10869048-C-CT | ** | |||||||
10795066-C-G | ** | |||||||
13570916-C-A | 11415240-C-A | ** | ||||||
13805256-C-A | 11684550-C-A | ** | ||||||
7256026-G-T | 7387985-G-T | ** | ||||||
56841967-C-A | ** | |||||||
10851005-C-T | ** | |||||||
7098709-CAA-C | 7230668-CAA-C | ** | ||||||
56845402-C-A | ** | |||||||
10756988-C-T | ** | |||||||
18864743-C-A | 16752863-C-A | ** | ||||||
10938773-C-A | ** | |||||||
8076855-T-A | 8208814-T-A | ** | ||||||
10795051-G-C | ** | |||||||
10748697-C-T | ** | |||||||
24869984-C-A | 22723837-C-A | IR1_R | ** | |||||
16968297-C-A | 14856417-C-A | ** | ||||||
10799626-A-T | ** | |||||||
14270528-C-A | 12149822-C-A | ** | ||||||
14846849-C-A | 12734915-C-A | ** | ||||||
16344636-C-A | 14232756-C-A | ** | ||||||
14574057-C-A | 12462257-C-A | ** | ||||||
20424877-G-T | 18262991-G-T | P5_Dst | ** | |||||
14076671-T-C | 11955965-T-C | ** | ||||||
10927894-C-T | ** | |||||||
25963867-CT-C | 23817720-CT-C | P1_Y1 | 34×T | ** | ||||
15070441-C-T | 12958532-C-T | ** | ||||||
15070442-A-G | 12958533-A-G | ** | ||||||
24296456-AACAC-A | 22150309-AACAC-A | P3_t1 | ** | |||||
10795023-A-G | ** | |||||||
10795569-C-A | ** | |||||||
10028568-C-A | 10190959-C-A | ** | ||||||
10924512-C-A | ** | |||||||
10859310-C-A | ** | |||||||
28660890-C-A | 26514743-C-A | ** | ||||||
10756990-G-T | ** | |||||||
10928820-A-T | ** | |||||||
10928819-CACCCA-C | ** | |||||||
9110325-G-T | ** | |||||||
13857840-C-A | 11737134-C-A | FT89181 | ** | |||||
56845225-C-A | ** | |||||||
2744752-G-T | 2876711-G-T | ** | ||||||
3012164-C-T | 3144123-C-T | ** | ||||||
3063202-C-A | 3195161-C-A | ** | ||||||
3390470-C-T | 3522429-C-T | ** | ||||||
3550607-C-A | 3682566-C-A | ** | ||||||
3606975-G-T | 3738934-G-T | ** | ||||||
3780885-C-A | 3912844-C-A | ** | ||||||
4008712-C-A | 4140671-C-A | ** | ||||||
4536777-C-A | 4668736-C-A | ** | ||||||
4952499-G-T | 5084458-G-T | ** | ||||||
4996894-A-T | 5128853-A-T | ** | ||||||
5066097-A-G | 5198056-A-G | ** | ||||||
5199439-G-T | 5331398-G-T | ** | ||||||
5274961-T-A | 5406920-T-A | ** | ||||||
5659184-G-T | 5791143-G-T | ** | ||||||
5758303-C-A | 5890262-C-A | ** | ||||||
5829148-T-A | 5961107-T-A | ** | ||||||
5832308-G-T | 5964267-G-T | ** | ||||||
5923769-C-A | 6055728-C-A | ** | ||||||
6073073-C-A | 6205032-C-A | ** | ||||||
6466126-C-A | 6598085-C-A | ** | ||||||
6641369-C-A | 6773328-C-A | ** | ||||||
6665450-T-A | 6797409-T-A | ** | ||||||
6791770-G-A | 6923729-G-A | ** | ||||||
7098702-T-TA | 7230661-T-TA | ** | ||||||
7221354-G-A | 7353313-G-A | ** | ||||||
7274951-C-A | 7406910-C-A | ** | ||||||
7423831-C-A | 7555790-C-A | ** | ||||||
7990370-G-A | 8122329-G-A | ** | ||||||
8076851-G-C | 8208810-G-C | ** | ||||||
8076854-T-A | 8208813-T-A | ** | ||||||
8173801-C-A | 8305760-C-A | ** | ||||||
8761964-C-A | 8893923-C-A | ** | ||||||
8902007-TTTTG-T | 9033966-TTTTG-T | ** | ||||||
9063171-G-A | 9225562-G-A | ** | ||||||
9186254-C-A | 9348645-C-A | ** | ||||||
9654239-C-A | 9816630-C-A | IR3_Prx | ** | |||||
9714713-C-T | 9877104-C-T | IR3_Prx | ** | |||||
9714734-A-T | 9877125-A-T | IR3_Prx | ** | |||||
10008147-C-G | 10170538-C-G | ** | ||||||
10657082-C-A | ** | |||||||
10688152-C-T | ** | |||||||
10750114-T-C | ** | |||||||
10750936-T-G | ** | |||||||
10751193-C-A | ** | |||||||
10754024-G-A | ** | |||||||
10756959-C-T | ** | |||||||
10756979-C-T | ** | |||||||
10756984-C-G | ** | |||||||
10776725-T-A | ** | |||||||
10776732-T-A | ** | |||||||
10792493-C-A | ** | |||||||
10794893-G-A | ** | |||||||
10795088-A-T | ** | |||||||
10796670-T-TCCTGTA | ** | |||||||
10799613-T-A | ** | |||||||
10801655-T-C | ** | |||||||
10801675-T-C | ** | |||||||
10801710-TC-T | ** | |||||||
10846713-G-T | ** | |||||||
10925053-C-A | ** | |||||||
10925816-C-A | ** | |||||||
10932682-G-T | ** | |||||||
10954966-C-A | ** | |||||||
10975878-C-A | ** | |||||||
11005503-C-A | ** | |||||||
11020140-C-CAATTA | ** | |||||||
11033947-C-A | ** | |||||||
13298699-C-A | 11143023-C-A | ** | ||||||
13441846-A-T | 11286170-A-T | ** | ||||||
13466343-G-C | 11310667-G-C | ** | ||||||
13694141-G-A | 11538465-G-A | ** | ||||||
11650481-T-A | ** | |||||||
11659521-G-C | ** | |||||||
11670753-G-T | ** | |||||||
11675475-C-A | ** | |||||||
13855101-C-A | 11734395-C-A | ** | ||||||
13971305-G-T | 11850599-G-T | ** | ||||||
14021490-C-A | 11900784-C-A | ** | ||||||
14098688-ATCCTCCAGGT-A | 11977982-ATCCTCCAGGT-A | ** | ||||||
14193004-T-C | 12072298-T-C | ** | ||||||
14270511-C-T | 12149805-C-T | FT116581 | ** | |||||
14301722-C-A | 12181016-C-A | ** | ||||||
14395131-C-A | 12274427-C-A | ** | ||||||
14470592-G-T | 12349861-G-T | ** | ||||||
14520856-A-T | 12409057-A-T | ** | ||||||
14553178-C-A | 12441379-C-A | ** | ||||||
14867100-T-A | 12755170-T-A | ** | ||||||
14910883-C-A | 12798950-C-A | ** | ||||||
15012701-G-A | 12900789-G-A | ** | ||||||
15076431-T-A | 12964521-T-A | ** | ||||||
16246065-C-T | 14134185-C-T | ** | ||||||
16274222-C-A | 14162342-C-A | ** | ||||||
16504973-G-T | 14393093-G-T | ** | ||||||
16750123-C-A | 14638243-C-A | ** | ||||||
17027698-C-A | 14915818-C-A | ** | ||||||
17218229-C-A | 15106349-C-A | ** | ||||||
17244937-C-A | 15133057-C-A | ** | ||||||
17501813-T-A | 15389933-T-A | ** | ||||||
17667057-G-T | 15555177-G-T | ** | ||||||
17740758-TG-T | 15628878-TG-T | ** | ||||||
18071938-GAACATGGATGA-G | 15960058-GAACATGGATGA-G | ** | ||||||
18379036-C-A | 16267156-C-A | P6_Prx | ** | |||||
18650486-C-A | 16538606-C-A | ** | ||||||
18780299-T-C | 16668419-T-C | ** | ||||||
18848990-A-T | 16737110-A-T | ** | ||||||
18858541-G-A | 16746661-G-A | ** | ||||||
19187418-TTCC-T | 17075538-TTCC-T | ** | ||||||
19249525-T-C | 17137645-T-C | ** | ||||||
19644626-G-T | 17532746-G-T | P5_Prx | ** | |||||
19982554-CTTTT-C | 17870674-CTTTT-C | P5_Prx | 14×T | ** | ||||
20554613-C-A | 18392727-C-A | P5_Dst | ** | |||||
21208530-C-A | 19046644-C-A | ** | ||||||
21285598-G-A | 19123712-G-A | FT118937 | ** | |||||
21514076-C-A | 19352190-C-A | ** | ||||||
21999948-C-A | 19838062-C-A | ** | ||||||
22366284-T-A | 20204398-T-A | DYZ19 | ** | |||||
22472414-G-C | 20310528-G-C | DYZ19 | ** | |||||
22489598-C-T | 20327712-C-T | DYZ19 | ** | |||||
23062685-G-T | 20900799-G-T | ** | ||||||
23138717-C-T | 20976831-C-T | ** | ||||||
23392234-C-A | 21230348-C-A | ** | ||||||
23825112-C-A | 21663226-C-A | ** | ||||||
24384937-G-T | 22238790-G-T | ** | ||||||
25592906-A-C | 23446759-A-C | P1_gr1 | ** | |||||
27461934-ATT-A | 25315787-ATT-A | P1_Y2 | ** | |||||
27692888-G-T | 25546741-G-T | P1_Y2 | ** | |||||
28345657-C-A | 26199510-C-A | P1_gr2 | ** | |||||
28525081-G-A | 26378934-G-A | ** | ||||||
28548640-C-T | 26402493-C-T | FT120037 | ** | |||||
28567941-G-T | 26421794-G-T | ** | ||||||
28581080-C-A | 26434933-C-A | ** | ||||||
28703414-T-C | 26557267-T-C | ** | ||||||
28784612-T-G | 26638465-T-G | ** | ||||||
56871549-C-A | ** | |||||||
13447102-C-CA | 11291426-C-CA | *** | ||||||
17645489-AATTT-A | 15533609-AATTT-A | 11×ATTT | *** | |||||
13488490-G-T | 11332814-G-T | *** | ||||||
13447106-CT-C | 11291430-CT-C | *** | ||||||
17946903-G-T | 15835023-G-T | M4863 | 11×T | *** | ||||
58981213-C-CTCCAT | 56835066-C-CTCCAT | *** | ||||||
13463337-G-T | 11307661-G-T | *** | ||||||
58985598-G-A | 56839451-G-A | *** | ||||||
13463321-C-A | 11307645-C-A | *** | ||||||
13869200-G-A | 11748494-G-A | *** | ||||||
14236026-C-CA | 12115320-C-CA | 16×A | *** | |||||
58985556-G-A | 56839409-G-A | *** | ||||||
21177231-C-T | 19015345-C-T | *** | ||||||
23823660-C-T | 21661774-C-T | BY148067 | *** | |||||
17463348-T-A | 15351468-T-A | FTB33688 | *** | |||||
58983637-C-A | 56837490-C-A | *** | ||||||
13487805-T-C | 11332129-T-C | *** | ||||||
58985571-T-C | 56839424-T-C | *** | ||||||
58981901-C-A | 56835754-C-A | *** | ||||||
58985639-A-G | 56839492-A-G | *** | ||||||
17050099-C-CT | 14938219-C-CT | 15×T | *** | |||||
58985636-C-G | 56839489-C-G | *** | ||||||
13478222-C-A | 11322546-C-A | *** | ||||||
10758035-C-T | *** | |||||||
10967557-A-C | FGC78181 | *** | ||||||
13869183-T-TC | 11748477-T-TC | *** | ||||||
11676777-G-T | *** | |||||||
16730003-GAAAA-G | 14618123-GAAAA-G | 17×A | *** | |||||
13486583-A-G | 11330907-A-G | *** | ||||||
19054342-CTTTT-C | 16942462-CTTTT-C | 16×T | *** | |||||
16354680-G-T | 14242800-G-T | *** | ||||||
10997747-T-A | *** | |||||||
56839379-G-T | *** | |||||||
56839402-G-A | *** | |||||||
56839421-A-T | *** | |||||||
56839445-G-A | *** | |||||||
10790281-T-C | *** | |||||||
10807291-C-A | *** | |||||||
10807307-A-G | *** | |||||||
10807343-A-C | *** | |||||||
10999879-C-A | *** | |||||||
56839459-TG-T | *** | |||||||
16188181-CTTTT-C | 14076301-CTTTT-C | 16×T | *** | |||||
10807316-G-A | *** | |||||||
56833358-C-G,T | *** | |||||||
10807306-G-A | *** | |||||||
10807336-TCA-T | *** | |||||||
56839462-T-TCC | *** | |||||||
10866048-C-T | FT46931 | *** | ||||||
14261737-TAA-T | 12141031-TAA-T | 11×A | *** | |||||
6434951-CT-C | 6566910-CT-C | 10×T | *** | |||||
15477291-CAAAA-C,CAAA | 13365411-CAAAA-C,CAAA | 18×A | *** | |||||
10967543-C-A | *** | |||||||
10769821-C-A | *** | |||||||
13461013-T-A,C | 11305337-T-A,C | *** | ||||||
10997746-T-A | FT439732 | *** | ||||||
11642951-C-A | *** | |||||||
10973960-C-T | *** | |||||||
10999905-A-G | *** | |||||||
10934823-T-G | *** | |||||||
10682505-TCCA-T | *** | |||||||
16702210-C-A | 14590330-C-A | *** | ||||||
10760367-C-A,T | *** | |||||||
15423474-C-CAA | 13311594-C-CAA | 16×A | *** | |||||
4995702-C-A | 5127661-C-A | *** | ||||||
21225071-C-A | 19063185-C-A | *** | ||||||
10997720-AT-A | *** | |||||||
13461035-T-A | 11305359-T-A | *** | ||||||
56829970-CTCCAATCCAT-C,CTCCACTCCAATCCGT | *** | |||||||
5562678-C-A | 5694637-C-A | *** | ||||||
7131859-C-A | 7263818-C-A | *** | ||||||
13372059-C-A | 11216383-C-A | *** | ||||||
4521612-TAAAAA-T,TAAA | 4653571-TAAAAA-T,TAAA | 17×A | *** | |||||
10880381-G-A,C | *** | |||||||
10925501-T-C,G | *** | |||||||
11033840-CTGCTC-C,CCACTG | *** | |||||||
11676451-C-T | *** | |||||||
16333531-C-A | 14221651-C-A | *** | ||||||
16749737-TTTT-T,TTTG | 14637857-TTTT-T,TTTG | *** | ||||||
22287622-T-A | 20125736-T-A | FT454991 | DYZ19 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.