Holladay

FGC: 5YFCH
MDKA Birth: United States > Virginia

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > Z39589 > DF49/S474 > Z2980 > FGC9595 > FGC9608

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
5YFCH
6103135-C-T 6235094-C-T FGC9603 +
19020366-A-G 16908486-A-G Z1453 CTS9677 YY+
21269484-A-C 19107598-A-C A10987M9313 Y+
8467374-G-C 8599333-G-C FGC9613 YY+
2800142-C-T 2932101-C-T FT74188 YY+
4012955-T-C 4144914-T-C FGC9596 +
4946561-C-T 5078520-C-T FGC9597 +
5752822-G-A 5884781-G-A FGC9601 +
6062672-T-A 6194631-T-A FGC9602 +
6159010-A-C 6290969-A-C FGC9604 IR3_Dst +
6897128-A-G 7029087-A-G FGC9606 YY+
6906871-G-T 7038830-G-T FGC9607 YY+
7421563-C-T 7553522-C-T FGC9609 YY+
8097220-A-T 8229179-A-T FGC9611 YY+
8120948-C-A 8252907-C-A FGC9612 YY+
8765750-A-G 8897709-A-G FGC9614 YY+
9887014-C-T 10049405-C-T FGC9617 YY+
10007391-C-T 10169782-C-T FGC9619 Y+
13127644-T-G 10617130-T-G FGC9620 +
14210349-G-A 12089643-G-A FGC9622 YY+
14408394-G-A 12287692-G-A FGC9624 YY+
14421429-G-A 12300704-G-A FGC9625 Y+
14438422-C-G 12317695-C-G FGC9626 Y+
15258034-T-G 13146118-T-G FGC9629 YY+
15423247-G-T 13311367-G-T FGC9630 Y+
16662815-G-C 14550935-G-C FGC9632 Y+
18907257-G-T 16795377-G-T FGC9634 YY+
21582285-T-G 19420399-T-G FGC9636 Y+
22055236-C-G 19893350-C-G FGC9637 YY+
22222170-A-C 20060284-A-C FGC9641 DYZ19 +
22473424-C-A 20311538-C-A FGC9642 DYZ19 +
22519425-C-A 20357539-C-A FGC9643 Y+
22841548-G-C 20679662-G-C FGC9644 Y+
23162412-G-A 21000526-G-A FGC9646 Y+
23305353-G-T 21143467-G-T FGC9647 YY+
28728655-G-T 26582508-G-T FGC9649 +
2837338-GTT-G 2969297-GTT-G +
4112611-A-G 4244570-A-G FGC9592 *
3350974-C-T 3482933-C-T FGC9593 *
3847650-G-C 3979609-G-C FGC9594 *
5703582-A-C 5835541-A-C FGC9600 *
6466952-C-A 6598911-C-A FGC9605 *
17829028-G-A 15717148-G-A FGC9633 Y*
22194086-G-A 20032200-G-A FGC9640 Y*
13405635-C-G 11249959-C-G Z7994 **
13287177-A-G 11131501-A-G **
22332781-G-A 20170895-G-A DYZ19 **
22266217-T-C 20104331-T-C DYZ19 **
13419165-G-GA 11263489-G-GA 8×A**
13441016-G-A 11285340-G-A **
2651883-C-CTTTT 2783842-C-CTTTT 19×T**
25246296-GCTT-G 23100149-GCTT-G P2_r1 5×CTT**
22150300-T-G 19988414-T-G **
4622770-G-T 4754729-G-T **
9428573-A-T 9590964-A-T **
13514118-A-C 11358442-A-C **
13637852-A-T 11482176-A-T FGC79063 **
20129659-C-T 18017779-C-T FGC79064 P5_Dst **
22489988-G-C 20328102-G-C DYZ19 **
22711445-A-C 20549559-A-C BY204364 **
16050984-TTC-T 13939104-TTC-T **
16051008-T-TTC 13939128-T-TTC **
16295953-G-GT 14184073-G-GT BY66411 **
19437732-AAG-A 17325852-AAG-A **
22249318-T-A 20087432-T-A DYZ19 ***
58876822-C-T 56714049-G-A ***
13486243-T-C 11330567-T-C BY86167 ***
58876834-A-C 56714037-T-G ***
58866391-A-T 56724480-T-A ***
58912416-A-T 56678455-T-A ***
13140115-CATTAAA-C 10629601-CATTAAA-C ***
22360334-C-A 20198448-C-A DYZ19 ***
22247476-A-G 20085590-A-G FGC79068 DYZ19 ***
22329991-T-A 20168105-T-A DYZ19 ***
22366714-A-T 20204828-A-T DYZ19 ***
22488502-T-A 20326616-T-A DYZ19 ***
58843631-T-A 56747240-A-T ***
10015413-AGAT-CGAC 10177804-AGAT-CGAC ***
22235087-AT-A 20073201-AT-A DYZ19 ***
22265842-GT-CA 20103956-GT-CA DYZ19 ***
22293093-GTT-ATG 20131207-GTT-ATG DYZ19 ***
58885276-TATTTTATTCCATGCC-T 56705575-CAAATGGCATGGAATA-C ***
58885303-TT-CA 56705567-AA-TG ***
22341597-T-G 20179711-T-G DYZ19 ***
13319979-C-T 11164303-C-T ***
10073376-C-A 10235767-C-A ***
13319994-C-G 11164318-C-G ***
19656572-C-T 17544692-C-T P5_Prx ***
22309406-A-T 20147520-A-T DYZ19 ***
22361295-T-G 20199409-T-G DYZ19 ***
13263468-GGT-ACA 11107792-GGT-ACA ***
19436734-AAGAA-GAGAG 17324854-AAGAA-GAGAG ***
13465768-C-A 11310092-C-A F18170 ***
22430155-T-C 20268269-T-C DYZ19 ***
13486262-G-A 11330586-G-A ***
19656562-T-C 17544682-T-C P5_Prx ***
19656678-C-T 17544798-C-T P5_Prx ***
22268320-T-G 20106434-T-G DYZ19 ***
22332813-C-A 20170927-C-A DYZ19 ***
27462488-T-A 25316341-T-A P1_Y2 15×AC***
58884224-ATTTGATGCCATTCCG-A 56706620-GATGGCATCAAACGGA-G ***
13842533-A-G 11721827-A-G ***
13842517-A-G 11721811-A-G ***
22488459-T-C 20326573-T-C DYZ19 ***
58844025-CA-C 56746844-AT-A ***
22281896-TC-GT 20120010-TC-GT DYZ19 ***
13483584-AC-A 11327908-AC-A ***
22268293-AGTGGTGACC-GGTGTTGAGT 20106407-AGTGGTGACC-GGTGTTGAGT DYZ19 ***
22344826-T-C 20182940-T-C DYZ19 ***
13728176-G-A 11572500-G-A ***
19656725-G-A 17544845-G-A P5_Prx ***
19660405-G-A 17548525-G-A P5_Prx ***
19660417-A-G 17548537-A-G P5_Prx ***
20541548-T-A 18379662-T-A P5_Dst ***
22289439-C-T 20127553-C-T DYZ19 ***
22289446-C-G 20127560-C-G DYZ19 ***
22359836-C-A 20197950-C-A DYZ19 ***
58872396-G-A 56718475-C-T ***
22360154-GGGTTTCTGT-TTGTGTCCTC 20198268-GGGTTTCTGT-TTGTGTCCTC DYZ19 ***
58829066-TTCCC-GTCCA 56761801-GGGAA-TGGAC ***
22309354-T-C 20147468-T-C DYZ19 ***
19660536-C-T 17548656-C-T P5_Prx ***
19660560-G-A 17548680-G-A P5_Prx ***
19660595-C-A 17548715-C-A P5_Prx ***
22309281-G-T 20147395-G-T DYZ19 ***
58912995-C-T 56677876-G-A ***
58995119-AGGCA-GGGCG 56848972-AGGCA-GGGCG ***
22362610-C-T 20200724-C-T DYZ19 ***
22419676-N-T 20257790-N-T DYZ19 ***
22235045-C-G 20073159-C-G DYZ19 ***
22504708-CCAGT-GCAGA 20342822-CCAGT-GCAGA DYZ19 ***
58869729-C-T 56721142-G-A ***
22236757-T-A 20074871-T-A DYZ19 ***
27651806-GAAAG-AAAAA 25505659-GAAAG-AAAAA P1_Y2 ***
9932756-T-G 10095147-T-G ***
19740983-T-A 17629103-T-A P5_Prx ***
22354429-T-A 20192543-T-A DYZ19 ***
22503176-G-T 20341290-G-T DYZ19 ***
58909166-C-A 56681705-G-T ***
58840452-ATTCGATTC-GTTCAATTA 56750411-GAATCGAAT-TAATTGAAC ***
58909337-GTA-TTC 56681532-TAC-GAA ***
9433061-T-C 9595452-T-C ***
9433171-A-G 9595562-A-G ***
9433178-G-T 9595569-G-T ***
22481742-T-A 20319856-T-A DYZ19 ***
10018302-C-G 10180693-C-G ***
13469506-A-G 11313830-A-G ***
17835121-G-A 15723241-G-A ***
7269610-C-CTTTT 7401569-C-CTTTT 22×T***
13469368-TG-CT 11313692-TG-CT ***
58831512-CATT-TATG 56759356-AATG-CATA ***
22332548-A-T 20170662-A-T DYZ19 ***
58831534-A-T 56759337-T-A ***
19025741-CAAG-GAAA 16913861-CAAG-GAAA ***
22354254-T-A 20192368-T-A DYZ19 ***
22241438-G-C 20079552-G-C DYZ19 ***
22332816-C-G 20170930-C-G DYZ19 ***
22341648-G-T 20179762-G-T DYZ19 ***
22341680-C-T 20179794-C-T DYZ19 ***
22341639-CATGG-AATGC 20179753-CATGG-AATGC DYZ19 ***
22341680-C-GT 20179794-C-GT DYZ19 ***
13728164-T-C 11572488-T-C ***
20393945-C-T 18232059-C-T P5_Dst ***
20393950-A-G 18232064-A-G P5_Dst ***
20393971-G-A 18232085-G-A P5_Dst ***
20393984-G-A 18232098-G-A P5_Dst ***
20574356-C-A 18412470-C-A P5_Dst ***
22756990-T-C 20595104-T-C ***
22223323-TAAAT-CAAAG 20061437-TAAAT-CAAAG DYZ19 ***
26124459-CGAAAG-AAAAAA 23978312-CGAAAG-AAAAAA P1_Y1 ***
22273773-A-T 20111887-A-T DYZ19 ***
22273748-A-T 20111862-A-T DYZ19 ***
22273755-A-T 20111869-A-T DYZ19 ***
9993273-TT-GC 10155664-TT-GC ***
22256849-GT-G 20094963-GT-G DYZ19 ***
22273746-A-T 20111860-A-T DYZ19 ***
22292975-T-A 20131089-T-A DYZ19 ***
13465822-ATAT-CTAG 11310146-ATAT-CTAG ***
22366823-AG-GC 20204937-AG-GC DYZ19 ***
22457227-C-CT 20295341-C-CT DYZ19 ***
22234964-C-T 20073078-C-T DYZ19 ***
58877015-G-C 56713856-C-G ***
4446664-T-G 4578623-T-G ***
22422834-A-C 20260948-A-C DYZ19 ***
22756974-T-C 20595088-T-C ***
22234852-A-T 20072966-A-T DYZ19 ***
22504393-G-C 20342507-G-C DYZ19 ***
22332725-T-C 20170839-T-C DYZ19 ***
13485309-T-C 11329633-T-C ***
10090672-T-A 10253063-T-A ***
22273781-G-C 20111895-G-C DYZ19 ***
13203967-TGACCACCCCGCCTC-T 11048291-TGACCACCCCGCCTC-T ***
13485284-A-G 11329608-A-G ***
22332832-T-C 20170946-T-C DYZ19 ***
6895044-AG-A 7027003-AG-A ***
24552097-C-T 22405950-C-T P3_t2 ***
10084304-G-A 10246695-G-A ***
22342624-A-T 20180738-A-T DYZ19 ***
22344670-G-A 20182784-G-A DYZ19 ***
22359779-A-T 20197893-A-T DYZ19 ***
9403521-G-GTTTTTT 9565912-G-GTTTTTT 21×T***
22344837-T-C 20182951-T-C DYZ19 ***
22252565-C-G 20090679-C-G DYZ19 ***
22245732-C-A 20083846-C-A DYZ19 ***
22356792-T-G 20194906-T-G DYZ19 ***
22273771-C-G 20111885-C-G DYZ19 ***
6499884-A-G 6631843-A-G ***
22267284-C-A 20105398-C-A DYZ19 ***
13689540-A-C 11533864-A-C BY45726 ***
22289483-G-A 20127597-G-A DYZ19 ***
22333537-C-T 20171651-C-T DYZ19 ***
22333544-C-T 20171658-C-T DYZ19 ***
22433304-T-C 20271418-T-C DYZ19 ***
26780722-G-A 24634575-G-A P1_g2 ***
22328421-TA-CT 20166535-TA-CT DYZ19 ***
22266251-A-AG 20104365-A-AG DYZ19 ***
22273771-CGA-GGT 20111885-CGA-GGT DYZ19 ***
13819082-GGAATGTAC-CGAGTGCAA 11698376-GGAATGTAC-CGAGTGCAA ***
22235025-ACTAA-TCTAT 20073139-ACTAA-TCTAT DYZ19 ***
22252895-CCTTA-TCTTC 20091009-CCTTA-TCTTC DYZ19 ***
22266029-CCTCCAGT-GCTGCAGA 20104143-CCTCCAGT-GCTGCAGA DYZ19 ***
22266041-TACGG-GGTGT 20104155-TACGG-GGTGT DYZ19 ***
22266054-GCAG-ACAA 20104168-GCAG-ACAA DYZ19 ***
22273608-GTTCATTAACAG-TTTCCTTCAGAT 20111722-GTTCATTAACAG-TTTCCTTCAGAT DYZ19 ***
22273721-GGTCT-TGTCC 20111835-GGTCT-TGTCC DYZ19 ***
22356799-TTG-GTC 20194913-TTG-GTC DYZ19 ***
22421916-A-AG 20260030-A-AG DYZ19 ***
22421919-TG-T 20260033-TG-T DYZ19 ***
22457188-TTTCG-GTTCT 20295302-TTTCG-GTTCT DYZ19 ***
7394879-T-A 7526838-T-A ***
7394863-A-G 7526822-A-G ***
7394867-A-C 7526826-A-C ***
7394875-A-C 7526834-A-C ***
26462947-G-A 24316800-G-A P1_Y1 ***
26462960-G-A 24316813-G-A P1_Y1 ***
58849244-C-A 56741627-G-T ***
22235070-G-C 20073184-G-C DYZ19 ***
22264912-G-A 20103026-G-A DYZ19 ***
22332465-A-G 20170579-A-G DYZ19 ***
22433309-C-A 20271423-C-A DYZ19 ***
22354326-G-A 20192440-G-A DYZ19 ***
22354224-G-A 20192338-G-A DYZ19 ***
22354244-G-T 20192358-G-T DYZ19 ***
22359820-C-A 20197934-C-A DYZ19 ***
2970321-T-G 3102280-T-G ***
3706709-C-G 3838668-C-G ***
4408883-G-A 4540842-G-A ***
5799770-C-T 5931729-C-T FT354894 ***
5962108-TCATA-T 6094067-TCATA-T ***
15173782-C-A 13061868-C-A 13×A***
17495729-T-G 15383849-T-G ***
22344834-A-T 20182948-A-T DYZ19 ***
58831538-T-A 56759333-A-T ***
22356780-GT-AG 20194894-GT-AG DYZ19 ***
22322619-T-C 20160733-T-C DYZ19 ***
22332737-T-A 20170851-T-A DYZ19 ***
25505124-C-T 23358977-C-T P1_gr1 39×T***
22356824-C-T 20194938-C-T DYZ19 ***
22504689-G-A 20342803-G-A DYZ19 ***
58893220-G-C 56697651-C-G ***
22252525-CTTCTTT-AATCTGG 20090639-CTTCTTT-AATCTGG DYZ19 ***
22356806-ACTTG-TCTTA 20194920-ACTTG-TCTTA DYZ19 ***
22420439-TA-G 20258553-TA-G DYZ19 ***
22360472-TAG-GAA 20198586-TAG-GAA DYZ19 ***
22267290-C-A 20105404-C-A DYZ19 ***
22268178-TTTGCAGCAT-GTTACAGCAC 20106292-TTTGCAGCAT-GTTACAGCAC DYZ19 ***
22344763-TGGTTCT-AGGTTCA 20182877-TGGTTCT-AGGTTCA DYZ19 ***
58840466-CATTGGAGTCA-GATTCGATTCG 56750395-TGACTCCAATG-CGAATCGAATC ***
2790318-TG-T 2922277-TG-T ***
13251673-T-C 11095997-T-C ***
13370797-T-C 11215121-T-C ***
13440873-A-G 11285197-A-G ***
16978147-C-T 14866267-C-T ***
22236422-G-A 20074536-G-A DYZ19 ***
22266183-G-A 20104297-G-A DYZ19 ***
24509903-AGT-A 22363756-AGT-A ***
58844027-T-TTCCA 56746842-A-AATGG ***
26544618-GAT-G 24398471-GAT-G P1_g2 14×AT***
22344755-C-A 20182869-C-A DYZ19 ***
22252515-G-A 20090629-G-A DYZ19 ***
13479365-G-T 11323689-G-T ***
19660446-A-G 17548566-A-G P5_Prx ***
58910818-A-C 56680053-T-G ***
8826708-CAG-AAA 8958667-CAG-AAA ***
22232074-C-A 20070188-C-A BY32362 DYZ19 ***
22481820-G-T 20319934-G-T DYZ19 ***
22273689-TACGGTC-AGTGGTG 20111803-TACGGTC-AGTGGTG DYZ19 ***
13808984-AT-GG 11688278-AT-GG ***
28802831-ATT-GTG 26656684-ATT-GTG ***
58999106-TGACA-AGACG 56852959-TGACA-AGACG ***
22264934-T-A 20103048-T-A DYZ19 ***
22354348-C-A 20192462-C-A DYZ19 ***
22356832-T-C 20194946-T-C DYZ19 ***
22481261-C-G 20319375-C-G DYZ19 ***
22309511-T-C 20147625-T-C DYZ19 ***
22344683-G-C 20182797-G-C DYZ19 ***
22354233-T-A 20192347-T-A DYZ19 ***
22354264-A-T 20192378-A-T DYZ19 ***
22421909-T-C 20260023-T-C DYZ19 ***
22433325-C-T 20271439-C-T DYZ19 ***
13485262-TT-GG 11329586-TT-GG ***
22333488-GGCAG-AGCAA 20171602-GGCAG-AGCAA DYZ19 ***
22335490-AATC-CTTT 20173604-AATC-CTTT DYZ19 ***
22265960-G-T 20104074-G-T DYZ19 ***
13487612-A-C 11331936-A-C ***
13487613-T-C 11331937-T-C ***
58875146-A-G 56715725-T-C ***
28370013-TAT-GAG 26223866-TAT-GAG P1_gr2 ***
22234387-AGAAAGAAGA-GGAAGGTAGT 20072501-AGAAAGAAGA-GGAAGGTAGT DYZ19 ***
13486294-G-C 11330618-G-C ***
20541596-A-G 18379710-A-G P5_Dst ***
22366654-C-A 20204768-C-A DYZ19 ***
58880279-CATTACACTCCAGTCT-C 56710571-AGTAATAGACTGGAGT-A ***
20541627-T-G 18379741-T-G P5_Dst ***
10037927-T-A 10200318-T-A ***
58893049-C-T 56697822-G-A ***
58866233-C-T 56724638-G-A ***
9963724-C-T 10126115-C-T BY82225 ***
58909154-C-T 56681717-G-A ***
13203958-CATTATGG-AATGACGGT 11048282-CATTATGG-AATGACGGT ***
22332475-AA-CT 20170589-AA-CT DYZ19 ***
58876379-A-T 56714492-T-A ***
22421832-C-T 20259946-C-T DYZ19 ***
4682363-A-T 4814322-A-T ***
22354223-T-A 20192337-T-A DYZ19 ***
26260525-G-A 24114378-G-A P1_Y1 ***
58876900-G-C 56713971-C-G ***
17835137-TC-T 15723257-TC-T ***
5430662-C-T 5562621-C-T ***
5430671-G-T 5562630-G-T ***
5430672-G-C 5562631-G-C ***
5430673-G-A 5562632-G-A ***
5430682-G-A 5562641-G-A ***
26902122-T-A 24755975-T-A P1_r3 ***
5430671-GGG-TCA 5562630-GGG-TCA ***
28385669-C-T 26239522-C-T P1_gr2 ***
26902111-C-T 24755964-C-T P1_r3 ***
26902128-T-A 24755981-T-A P1_r3 ***
26902130-C-A 24755983-C-A P1_r3 ***
58876892-T-C 56713979-A-G ***
13460134-TA-CC 11304458-TA-CC ***
23527279-TAC-T 21365393-TAC-T ***
22269981-C-CAG 20108095-C-CAG DYZ19 ***
10092099-A-T 10254490-A-T ***
22268348-ATA-GTG 20106462-ATA-GTG DYZ19 ***
58912967-T-C 56677904-A-G ***
22362590-C-T 20200704-C-T DYZ19 ***
7107011-CTATATATATATA-C 7238970-CTATATATATATA-C 20×TA***
19718855-T-A 17606975-T-A P5_Prx ***
22289523-C-T 20127637-C-T DYZ19 ***
14787806-G-A 12675876-G-A 11×TA***
13222142-GA-G 11066466-GA-G ***
16478215-G-A 14366335-G-A ***
2970373-A-G 3102332-A-G ***
18008700-T-G 15896820-T-G P7_Dst ***
13306462-GGGC-AGGT 11150786-GGGC-AGGT ***
6541475-C-CAGAG 6673434-C-CAGAG 17×AG***
6128407-A-G 6260366-A-G ***
13487955-G-A 11332279-G-A ***
22268290-C-T 20106404-C-T DYZ19 ***
3336348-T-C 3468307-T-C ***
3336350-T-G 3468309-T-G ***
3336357-A-C 3468316-A-C ***
3483637-G-C 3615596-G-C FGC8694 15×AC***
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13481402-C-A 11325726-C-A ***
13487622-G-A 11331946-G-A ***
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19718876-T-G 17606996-T-G P5_Prx ***
19718878-C-G 17606998-C-G P5_Prx ***
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19718901-A-G 17607021-A-G P5_Prx ***
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19718920-T-A 17607040-T-A P5_Prx ***
19793822-C-T 17681942-C-T P5_Prx ***
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19800515-T-G 17688635-T-G P5_Prx ***
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20266526-C-G 18104640-C-G P5_Dst ***
20266559-G-A 18104673-G-A P5_Dst ***
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20393929-G-A 18232043-G-A P5_Dst ***
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20393972-C-T 18232086-C-T P5_Dst ***
20393979-T-C 18232093-T-C P5_Dst ***
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20393995-A-G 18232109-A-G P5_Dst ***
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20557836-C-T 18395950-C-T P5_Dst ***
20557878-G-A 18395992-G-A P5_Dst ***
20557888-T-C 18396002-T-C P5_Dst ***
20557890-A-G 18396004-A-G P5_Dst ***
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21057890-C-A 18896004-C-A ***
21829607-T-A 19667721-T-A ***
21829770-T-A 19667884-T-A ***
22226524-T-G 20064638-T-G DYZ19 ***
22226526-A-T 20064640-A-T DYZ19 ***
22231660-A-G 20069774-A-G DYZ19 ***
22231699-C-A 20069813-C-A DYZ19 ***
22247456-C-A 20085570-C-A DYZ19 ***
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22265796-T-A 20103910-T-A DYZ19 ***
22282160-C-T 20120274-C-T DYZ19 ***
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22309516-C-T 20147630-C-T DYZ19 ***
22329967-T-G 20168081-T-G DYZ19 ***
22332599-C-T 20170713-C-T DYZ19 ***
22332729-C-T 20170843-C-T DYZ19 ***
22337092-C-T 20175206-C-T DYZ19 ***
22337095-T-G 20175209-T-G DYZ19 ***
22342940-G-T 20181054-G-T DYZ19 ***
22354063-T-A 20192177-T-A DYZ19 ***
22354202-A-G 20192316-A-G DYZ19 ***
22354211-T-G 20192325-T-G DYZ19 ***
22354323-T-A 20192437-T-A DYZ19 ***
22360493-T-C 20198607-T-C DYZ19 ***
22367114-T-A 20205228-T-A DYZ19 ***
22421477-A-T 20259591-A-T DYZ19 ***
22421514-C-T 20259628-C-T DYZ19 ***
22421852-A-G 20259966-A-G DYZ19 ***
22433196-C-G 20271310-C-G DYZ19 ***
22433223-A-T 20271337-A-T DYZ19 ***
22481886-C-G 20320000-C-G DYZ19 ***
22498356-T-G 20336470-T-G DYZ19 ***
22503228-G-A 20341342-G-A DYZ19 ***
22503438-G-A 20341552-G-A DYZ19 ***
22637462-G-A 20475576-G-A ***
22637464-A-G 20475578-A-G ***
22637471-G-C 20475585-G-C ***
22637473-A-T 20475587-A-T ***
22987770-C-T 20825884-C-T ***
23206513-G-T 21044627-G-T ***
23228046-G-T 21066160-G-T FGC79065 ***
23717317-G-A 21555431-G-A ***
23717322-T-A 21555436-T-A ***
23717337-G-C 21555451-G-C ***
23717345-A-T 21555459-A-T ***
23717346-A-C 21555460-A-C ***
23717347-C-A 21555461-C-A ***
24489538-C-T 22343391-C-T ***
24696383-T-C 22550236-T-C P3_b2 ***
25421916-C-T 23275769-C-T P2_r2 ***
26059855-T-A 23913708-T-A P1_Y1 ***
26059872-A-T 23913725-A-T P1_Y1 ***
26059885-G-T 23913738-G-T P1_Y1 ***
26249438-T-G 24103291-T-G P1_Y1 ***
26357247-C-A 24211100-C-A P1_Y1 ***
26357250-C-T 24211103-C-T P1_Y1 ***
26357368-C-T 24211221-C-T P1_Y1 ***
26357369-T-G 24211222-T-G P1_Y1 ***
26357370-T-C 24211223-T-C P1_Y1 ***
26357377-T-G 24211230-T-G P1_Y1 ***
26357378-G-A 24211231-G-A P1_Y1 ***
26357381-G-A 24211234-G-A P1_Y1 ***
26357384-C-T 24211237-C-T P1_Y1 ***
26902121-C-A 24755974-C-A P1_r3 ***
27187247-T-G 25041100-T-G P1_g3 ***
27187258-T-G 25041111-T-G P1_g3 ***
27187262-A-G 25041115-A-G P1_g3 ***
27187266-C-T 25041119-C-T P1_g3 ***
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27187280-A-G 25041133-A-G P1_g3 ***
27187287-C-G 25041140-C-G P1_g3 ***
27225306-T-G 25079159-T-G P1_g3 ***
27225309-G-A 25079162-G-A P1_g3 ***
27225310-T-A 25079163-T-A P1_g3 ***
27225312-A-G 25079165-A-G P1_g3 ***
27225313-C-T 25079166-C-T P1_g3 ***
27225337-G-T 25079190-G-T P1_g3 ***
27321714-C-A 25175567-C-A P1_g3 ***
27363411-G-T 25217264-G-T P1_g3 ***
27363412-T-A 25217265-T-A P1_g3 ***
27363416-A-C 25217269-A-C P1_g3 ***
27363417-A-T 25217270-A-T P1_g3 ***
27363423-C-T 25217276-C-T P1_g3 ***
27363428-T-G 25217281-T-G P1_g3 ***
27363429-T-A 25217282-T-A P1_g3 ***
27363430-A-C 25217283-A-C P1_g3 ***
27363431-A-T 25217284-A-T P1_g3 ***
27363432-G-C 25217285-G-C P1_g3 ***
27363443-A-T 25217296-A-T P1_g3 ***
27363452-C-G 25217305-C-G P1_g3 ***
27637424-C-T 25491277-C-T P1_Y2 ***
27746319-T-C 25600172-T-C P1_Y2 ***
27746324-A-T 25600177-A-T P1_Y2 ***
27746325-T-C 25600178-T-C P1_Y2 ***
27746328-A-T 25600181-A-T P1_Y2 ***
27746329-T-C 25600182-T-C P1_Y2 ***
27746344-A-T 25600197-A-T P1_Y2 ***
27746346-A-T 25600199-A-T P1_Y2 ***
27746351-C-G 25600204-C-G P1_Y2 ***
27746356-A-T 25600209-A-T P1_Y2 ***
28015737-A-G 25869590-A-G P1_Y2 ***
28015741-T-C 25869594-T-C P1_Y2 ***
28015743-A-G 25869596-A-G P1_Y2 ***
28015749-T-G 25869602-T-G P1_Y2 ***
28015750-A-C 25869603-A-C P1_Y2 ***
28015752-A-C 25869605-A-C P1_Y2 ***
28015753-C-T 25869606-C-T P1_Y2 ***
28015759-G-T 25869612-G-T P1_Y2 ***
28072165-A-G 25926018-A-G P1_Y2 ***
28155466-C-A 26009319-C-A P1_b4 ***
28190567-G-C 26044420-G-C P1_b4 ***
28190570-A-G 26044423-A-G P1_b4 ***
28190573-A-T 26044426-A-T P1_b4 ***
28190579-T-G 26044432-T-G P1_b4 ***
28190580-T-C 26044433-T-C P1_b4 ***
28190591-A-G 26044444-A-G P1_b4 ***
28190593-A-T 26044446-A-T P1_b4 ***
28403344-T-G 26257197-T-G P1_gr2 ***
28403347-A-C 26257200-A-C P1_gr2 ***
28403366-A-T 26257219-A-T P1_gr2 ***
28403367-G-T 26257220-G-T P1_gr2 ***
28403369-A-T 26257222-A-T P1_gr2 ***
28403370-A-T 26257223-A-T P1_gr2 ***
28403373-T-G 26257226-T-G P1_gr2 ***
28403379-A-T 26257232-A-T P1_gr2 ***
28403380-C-G 26257233-C-G P1_gr2 ***
28439610-A-C 26293463-A-C P1_gr2 ***
28439616-G-C 26293469-G-C P1_gr2 ***
28439618-A-C 26293471-A-C P1_gr2 ***
28439619-T-C 26293472-T-C P1_gr2 ***
28439622-A-C 26293475-A-C P1_gr2 ***
28439623-T-C 26293476-T-C P1_gr2 ***
28439624-T-C 26293477-T-C P1_gr2 ***
28439626-A-C 26293479-A-C P1_gr2 ***
28439627-T-C 26293480-T-C P1_gr2 ***
28439629-T-C 26293482-T-C P1_gr2 ***
28439638-A-C 26293491-A-C P1_gr2 ***
28439639-T-C 26293492-T-C P1_gr2 ***
28439648-C-T 26293501-C-T P1_gr2 ***
28439650-A-T 26293503-A-T P1_gr2 ***
28439657-G-T 26293510-G-T P1_gr2 ***
28456602-G-T 26310455-G-T P1_gr2 ***
28456603-C-G 26310456-C-G P1_gr2 ***
28456622-T-C 26310475-T-C P1_gr2 ***
28550965-A-G 26404818-A-G ***
58822905-T-A 56767966-A-T ***
58822910-G-T 56767961-C-A ***
58822914-G-T 56767957-C-A ***
58822921-A-C 56767950-T-G ***
58822935-T-C 56767936-A-G ***
58822937-C-T 56767934-G-A ***
58826682-T-C 56764189-A-G ***
58827748-T-A 56763123-A-T ***
58828773-C-T 56762098-G-A ***
58829110-A-T 56761761-T-A ***
58846266-T-A 56744605-A-T ***
58848590-C-T 56742281-G-A ***
58854244-A-T 56736627-T-A ***
58854250-T-A 56736621-A-T ***
58866402-G-C 56724469-C-G ***
58868296-C-T 56722575-G-A ***
58876884-G-T 56713987-C-A ***
58876885-G-C 56713986-C-G ***
58876889-A-C 56713982-T-G ***
58876897-T-C 56713974-A-G ***
58876904-A-G 56713967-T-C ***
58876926-A-C 56713945-T-G ***
58876927-T-C 56713944-A-G ***
58876932-G-C 56713939-C-G ***
58877035-C-T 56713836-G-A ***
58877146-A-T 56713725-T-A ***
58877159-A-T 56713712-T-A ***
58882162-C-T 56708709-G-A ***
58893211-T-A 56697660-A-T ***
58893304-C-G 56697567-G-C ***
58893305-T-C 56697566-A-G ***
58903611-C-G 56687260-G-C ***
58903822-C-A 56687049-G-T ***
58904274-G-T 56686597-C-A ***
58904293-C-T 56686578-G-A ***
58908906-A-T 56681965-T-A ***
58909160-C-A 56681711-G-T ***
58909344-T-G 56681527-A-C ***
58910834-T-C 56680037-A-G ***
58910838-A-C 56680033-T-G ***
58912971-G-T 56677900-C-A ***
58913002-T-C 56677869-A-G ***
58913018-C-A 56677853-G-T ***
58913046-A-T 56677825-T-A ***
9996962-TG-CA 10159353-TG-CA ***
13470854-TT-CG 11315178-TT-CG ***
13467524-AC-GA 11311848-AC-GA ***
3612669-CAAAA-C 3744628-CAAAA-C 13×A***
3838632-T-TTTTTTTG 3970591-T-TTTTTTTG ***
3902819-T-AA 4034778-T-AA ***
3902828-TATTTTG-AATGT 4034787-TATTTTG-AATGT ***
3902839-TA-T 4034798-TA-T ***
3902849-AT-A 4034808-AT-A ***
4221231-TAAAAAA-T 4353190-TAAAAAA-T 19×A***
5224925-TCAAA-T 5356884-TCAAA-T ***
5430694-C-TT 5562653-C-TT ***
5787575-A-ATT 5919534-A-ATT 15×T***
7199342-C-CTTTTTTTT 7331301-C-CTTTTTTTT 24×T***
9577032-AG-A 9739423-AG-A IR3_Prx ***
9915056-TTAACCT-ATAAATC 10077447-TTAACCT-ATAAATC ***
10013155-GT-AC 10175546-GT-AC ***
10016485-AGAT-TGAC 10178876-AGAT-TGAC ***
10018869-GTGT-ATGTG 10181260-GTGT-ATGTG ***
10037937-AG-GT 10200328-AG-GT ***
10037945-CCCAGGCTCCCTG-TCCGGGATCCTCA 10200336-CCCAGGCTCCCTG-TCCGGGATCCTCA ***
13257260-AAGGC-GAGGT 11101584-AAGGC-GAGGT ***
13467565-TCCTGTAGG-CCCTTTGGT 11311889-TCCTGTAGG-CCCTTTGGT ***
13470058-CGGCG-TGGCT 11314382-CGGCG-TGGCT ***
13485161-GA-AG 11329485-GA-AG ***
13485775-CAATT-GAATA 11330099-CAATT-GAATA ***
13486228-CAATGCCC-TAAATCCCA 11330552-CAATGCCC-TAAATCCCA ***
13514118-ACAA-CCAC 11358442-ACAA-CCAC ***
13669644-A-AT 11513968-A-AT ***
13699812-GTT-ATG 11544136-GTT-ATG ***
13717241-GACACGAATCA-G 11561565-GACACGAATCA-G ***
15011299-CAAA-C 12899384-CAAAATA-C ***
15882074-C-CAAAA 13770194-C-CAAAA 25×A***
17946915-GTTTG-TTTT 15835035-GTTTG-TTTT ***
18447621-G-GTTTTTT 16335741-G-GTTTTTT P6_Dst 18×T***
18565061-C-CAAA 16453181-C-CAAA 27×A***
19793804-GTTTGTC-CTCTGTG 17681924-GTTTGTC-CTCTGTG P5_Prx ***
19793832-A-AG 17681952-A-AG P5_Prx ***
19793835-AG-A 17681955-AG-A P5_Prx ***
19793846-GAGCT-TAGCA 17681966-GAGCT-TAGCA P5_Prx ***
19800488-GATTG-AATTC 17688608-GATTG-AATTC P5_Prx ***
19800503-GTG-TT 17688623-GTG-TT P5_Prx ***
19847631-CTGCTTTTTTT-C 17735751-CTGCTTTTTTT-C P5_Prx ***
19847634-CTTTTTTTTTT-C 17735754-CTTTTTTTTTT-C P5_Prx 28×T***
19847652-TTTTTTTTTTTG-T 17735772-TTTTTTTTTTTG-T P5_Prx ***
22234886-CA-C 20073000-CA-C DYZ19 ***
22266014-AGCTT-CAATA 20104128-AGCTT-CAATA DYZ19 ***
22329961-GTTT-G 20168075-GTTT-G DYZ19 ***
22332798-CA-C 20170912-CA-C DYZ19 ***
22332801-TTA-T 20170915-TTA-T DYZ19 ***
22332806-GGTGTTACGTC-AGAATGAAGCTG 20170920-GGTGTTACGTC-AGAATGAAGCTG DYZ19 ***
22332820-AGTTTGTT-A 20170934-AGTTTGTT-A DYZ19 ***
22332829-CT-C 20170943-CT-C DYZ19 ***
22332834-GA-G 20170948-GA-G DYZ19 ***
22332837-GT-G 20170951-GT-G DYZ19 ***
22332840-TCCA-T 20170954-TCCA-T DYZ19 ***
22332848-TTC-G 20170962-TTC-G DYZ19 ***
22332853-ACTTCTGG-A 20170967-ACTTCTGG-A DYZ19 ***
22344682-AGT-TAC 20182796-AGT-TAC DYZ19 ***
22344708-TTGTTA-GTATTT 20182822-TTGTTA-GTATTT DYZ19 ***
22420433-A-CC 20258547-A-CC DYZ19 ***
22498488-TTG-GTT 20336602-TTG-GTT DYZ19 ***
25383925-A-AG 23237778-A-AG P2_r2 ***
25508327-C-CAAAAAAAAAA 23362180-C-CAAAAAAAAAA P1_gr1 17×A***
25885856-GAAGG-AAAGA 23739709-GAAGG-AAAGA P1_Y1 ***
26260511-CA-TG 24114364-CA-TG P1_Y1 ***
26260519-CA-TG 24114372-CA-TG P1_Y1 ***
28802746-TTCAAATTGCATA-GTGGAGTGGAATG 26656599-TTCAAATTGCATA-GTGGAGTGGAATG ***
58861961-G-GTTTCC 56728909-T-TGGAAA ***
58861963-T-TGGC 56728907-A-AGCC ***
58861976-A-AN ***
58909357-ATCCA-TTCCT 56681510-TGGAT-AGGAA ***
58913046-ACCT-TCCA 56677822-AGGT-TGGA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.