Rhodes
BigY2: 173376MDKA Birth: England
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 173376 |
---|---|---|---|---|---|---|---|---|
30520-C-A | FGCLR36 | A+ | ||||||
22284481-G-C | 20122595-G-C | DYZ19 | A+ | |||||
20650556-G-T | 18488670-G-T | P4_Prx | A* | |||||
19694374-C-A | 17582494-C-A | P5_Prx | A* | |||||
19845768-C-T | 17733888-C-T | P5_Prx | A* | |||||
19956103-G-T | 17844223-G-T | P5_Prx | A* | |||||
22308849-G-A | 20146963-G-A | DYZ19 | A* | |||||
26054270-G-A | 23908123-G-A | P1_Y1 | A* | |||||
26188280-A-C | 24042133-A-C | P1_Y1 | A* | |||||
17842434-C-A | 15730554-C-A | BY117724 | Y | Y | + | |||
6693774-GTTCTT-G | 6825733-GTTCTT-G | + | ||||||
7056217-G-T | 7188176-G-T | BY63084 | Y | Y | + | |||
8139610-T-C | 8271569-T-C | BY70241 | Y | Y | + | |||
8488116-A-T | 8620075-A-T | BY73315 | Y | Y | + | |||
8575144-C-T | 8707103-C-T | BY74170 | Y | Y | + | |||
8777105-G-GC | 8909064-G-GC | + | ||||||
9381456-A-G | 9543847-A-G | BY78977 | Y | + | ||||
9495179-G-A | 9657570-G-A | BY79916 | + | |||||
13713774-C-G | 11558098-C-G | BY89550 | + | |||||
14275584-C-A | 12154878-C-A | BY94485 | Y | Y | + | |||
14855042-A-C | 12743108-A-C | BY98033 | Y | Y | + | |||
17136740-T-A | 15024860-T-A | BY112569 | Y | Y | + | |||
17524811-GAGTGAAC-G | 15412931-GAGTGAAC-G | + | ||||||
18256617-C-T | 16144737-C-T | FGC27059 | + | |||||
22246814-T-C | 20084928-T-C | BY214067 | DYZ19 | + | ||||
24464468-A-C | 22318321-A-C | BY150139 | Y | + | ||||
24507073-T-A | 22360926-T-A | BY150431 | + | |||||
7611-C-T | + | |||||||
22281467-G-A | 20119581-G-A | DYZ19 | * | |||||
22275784-C-G | 20113898-C-G | DYZ19 | * | |||||
26047370-G-C | 23901223-G-C | P1_Y1 | * | |||||
27915030-C-G | 25768883-C-G | P1_Y2 | * | |||||
5415322-G-C | 5547281-G-C | ** | ||||||
15323560-C-A | 13211678-C-A | ** | ||||||
14195325-C-A | 12074619-C-A | ** | ||||||
6634247-A-C | 6766206-A-C | ** | ||||||
14639061-C-T | 12527130-C-T | ** | ||||||
18687515-T-G | 16575635-T-G | ** | ||||||
21135017-T-C | 18973131-T-C | Y10036 Z9569 | ** | |||||
7270318-C-T | 7402277-C-T | ** | ||||||
15410626-T-C | 13298746-T-C | ** | ||||||
21623812-G-GT | 19461926-G-GT | 25×T | ** | |||||
16921313-C-A | 14809433-C-A | ** | ||||||
18867365-C-A | 16755485-C-A | ** | ||||||
13974687-C-T | 11853981-C-T | ** | ||||||
13468244-G-T | 11312568-G-T | ** | ||||||
23421035-C-T | 21259149-C-T | ** | ||||||
20089249-G-C | 17977369-G-C | P5_Dst | ** | |||||
20645883-C-T | 18483997-C-T | P4_Prx | ** | |||||
17193072-C-A | 15081192-C-A | ** | ||||||
11018773-TCTCCA-T | ** | |||||||
15882058-G-A | 13770178-G-A | ** | ||||||
20332010-T-A | 18170124-T-A | P5_Dst | ** | |||||
15542686-T-G | 13430806-T-G | ** | ||||||
8720544-C-A | 8852503-C-A | ** | ||||||
20326052-G-T | 18164166-G-T | P5_Dst | ** | |||||
22703588-T-C | 20541702-T-C | ** | ||||||
22703591-GTC-G | 20541705-GTC-G | ** | ||||||
20645876-A-G | 18483990-A-G | P4_Prx | ** | |||||
23421026-C-A | 21259140-C-A | ** | ||||||
10877816-T-A | ** | |||||||
17146523-C-A | 15034643-C-A | ** | ||||||
18926895-AAG-A | 16815015-AAG-A | ** | ||||||
14224355-C-A | 12103649-C-A | ** | ||||||
14526611-C-A | 12414812-C-A | ** | ||||||
18959199-A-G | 16847319-A-G | ** | ||||||
14754095-G-T | 12642164-G-T | ** | ||||||
15670277-G-T | 13558397-G-T | FT216701 | ** | |||||
19444155-C-A | 17332275-C-A | ** | ||||||
5216395-C-A | 5348354-C-A | ** | ||||||
20326063-A-T | 18164177-A-T | P5_Dst | ** | |||||
13217853-C-A | 11062177-C-A | ** | ||||||
19247108-C-A | 17135228-C-A | ** | ||||||
10658191-C-A | ** | |||||||
10808609-T-A | ** | |||||||
10808618-T-TTCCAA | ** | |||||||
10808646-C-T | ** | |||||||
10986677-N-C | ** | |||||||
28679065-C-A | 26532918-C-A | ** | ||||||
27546765-A-G | 25400618-A-G | P1_Y2 | ** | |||||
10826590-A-T | ** | |||||||
28541968-TA-T | 26395821-TA-T | 9×A | ** | |||||
13710036-C-A | 11554360-C-A | ** | ||||||
5200766-G-T | 5332725-G-T | ** | ||||||
9511415-G-T | 9673806-G-T | ** | ||||||
10868041-C-T | ** | |||||||
20629812-T-G | 18467926-T-G | P4_Prx | ** | |||||
7156905-C-A | 7288864-C-A | ** | ||||||
10789776-C-A | ** | |||||||
10946891-C-A | ** | |||||||
17255059-C-A | 15143179-C-A | ** | ||||||
6167453-T-TC | 6299412-T-TC | IR3_Dst | ** | |||||
10958550-C-G | ** | |||||||
6651376-C-A | 6783335-C-A | ** | ||||||
27417732-T-A | 25271585-T-A | P1_g3 | ** | |||||
27417740-C-T | 25271593-C-T | P1_g3 | ** | |||||
15280718-C-A | 13168817-C-A | ** | ||||||
6150009-G-GTA | 6281968-G-GTA | IR3_Dst | 19×TA | ** | ||||
24884205-C-T | 22738058-C-T | g1 | ** | |||||
4069574-C-A | 4201533-C-A | ** | ||||||
28542968-C-A | 26396821-C-A | ** | ||||||
18687530-G-T | 16575650-G-T | ** | ||||||
5059679-C-A | 5191638-C-A | ** | ||||||
15565369-C-A | 13453489-C-A | ** | ||||||
28610154-C-A | 26464007-C-A | ** | ||||||
10868112-T-C | ** | |||||||
5895149-G-GTA | 6027108-G-GTA | ** | ||||||
17284554-G-T | 15172674-G-T | ** | ||||||
7821047-C-A | 7953006-C-A | ** | ||||||
14622100-C-A | 12510298-C-A | ** | ||||||
10992260-C-A | ** | |||||||
22171637-G-T | 20009751-G-T | ** | ||||||
7237263-GAA-G | 7369222-GAA-G | 11×A | ** | |||||
9508440-C-T | 9670831-C-T | ** | ||||||
3951361-G-A | 4083320-G-A | ** | ||||||
13885857-CTTTTTTT-C | 11765151-CTTTTTTT-C | 19×T | ** | |||||
16981252-C-A | 14869372-C-A | ** | ||||||
5969837-C-A | 6101796-C-A | ** | ||||||
14216316-C-A | 12095610-C-A | ** | ||||||
22188739-C-A | 20026853-C-A | ** | ||||||
8095345-C-A | 8227304-C-A | ** | ||||||
16044957-C-A | 13933077-C-A | ** | ||||||
7400150-C-A | 7532109-C-A | FT358582 | ** | |||||
11021905-C-A | ** | |||||||
6531428-G-T | 6663387-G-T | ** | ||||||
19449242-C-A | 17337362-C-A | ** | ||||||
14007301-C-A | 11886595-C-A | ** | ||||||
23059616-C-A | 20897730-C-A | ** | ||||||
14933635-C-A | 12821700-C-A | ** | ||||||
24884189-GA-G | 22738042-GA-G | g1 | ** | |||||
13323494-CAAAAAA-C | 11167818-CAAAAAA-C | 24×A | ** | |||||
13198095-C-A | 11042419-C-A | ** | ||||||
10653065-C-A | ** | |||||||
9925314-C-A | 10087705-C-A | ** | ||||||
10874526-G-T | ** | |||||||
22052604-C-A | 19890718-C-A | ** | ||||||
16679308-C-A | 14567428-C-A | ** | ||||||
14700847-C-A | 12588913-C-A | ** | ||||||
21148572-C-A | 18986686-C-A | ** | ||||||
13828355-C-A | 11707649-C-A | ** | ||||||
16745201-C-A | 14633321-C-A | Y97158 | ** | |||||
14845414-C-A | 12733480-C-A | ** | ||||||
7275003-C-A | 7406962-C-A | ** | ||||||
14518474-C-A | 12406675-C-A | ** | ||||||
3680465-C-A | 3812424-C-A | ** | ||||||
11652015-C-A | ** | |||||||
22093015-C-A | 19931129-C-A | ** | ||||||
13936388-C-A | 11815682-C-A | ** | ||||||
23317685-TTG-T | 21155799-TTG-T | ** | ||||||
14649432-C-A | 12537497-C-A | ** | ||||||
10866036-C-A | ** | |||||||
21134992-T-C | 18973106-T-C | ** | ||||||
10958581-C-T | ** | |||||||
21979917-T-A | 19818031-T-A | ** | ||||||
4467015-C-A | 4598974-C-A | ** | ||||||
15396787-C-A | 13284907-C-A | ** | ||||||
19523380-C-A | 17411500-C-A | ** | ||||||
10800820-T-A | ** | |||||||
8907658-C-A | 9039617-C-A | ** | ||||||
23059627-C-A | 20897741-C-A | ** | ||||||
4094498-C-A | 4226457-C-A | ** | ||||||
28742583-C-A | 26596436-C-A | ** | ||||||
13195796-C-A | 11040120-C-A | ** | ||||||
8737785-C-A | 8869744-C-A | ** | ||||||
5690942-C-A | 5822901-C-A | ** | ||||||
16018355-C-A | 13906475-C-A | ** | ||||||
25246483-T-TC | 23100336-T-TC | P2_r1 | ** | |||||
7336949-C-A | 7468908-C-A | ** | ||||||
10866050-T-A | ** | |||||||
15677303-A-G | 13565423-A-G | ** | ||||||
10950293-C-A | ** | |||||||
13804109-C-A | 11683403-C-A | ** | ||||||
13710034-A-G | 11554358-A-G | ** | ||||||
14578472-C-A | 12466672-C-A | ** | ||||||
15532400-C-A | 13420520-C-A | ** | ||||||
6688729-C-A | 6820688-C-A | ** | ||||||
15566749-C-A | 13454869-C-A | ** | ||||||
7695767-C-A | 7827726-C-A | ** | ||||||
6642940-C-A | 6774899-C-A | ** | ||||||
8690329-C-T | 8822288-C-T | ** | ||||||
7432433-A-G | 7564392-A-G | ** | ||||||
19202784-T-G | 17090904-T-G | ** | ||||||
17243758-C-A | 15131878-C-A | ** | ||||||
10956486-C-A | ** | |||||||
28625954-C-A | 26479807-C-A | ** | ||||||
15580047-C-G | 13468167-C-G | ** | ||||||
17865291-C-A | 15753411-C-A | ** | ||||||
6445120-C-A | 6577079-C-A | ** | ||||||
5557390-C-A | 5689349-C-A | ** | ||||||
25099868-C-A | 22953721-C-A | g1 | ** | |||||
17576164-C-A | 15464284-C-A | ** | ||||||
15546196-C-A | 13434316-C-A | ** | ||||||
11009275-C-A | ** | |||||||
3627916-A-T | 3759875-A-T | ** | ||||||
5871402-C-A | 6003361-C-A | ** | ||||||
21202559-C-A | 19040673-C-A | ** | ||||||
5603483-A-G | 5735442-A-G | ** | ||||||
22586960-C-A | 20425074-C-A | ** | ||||||
20661113-T-TC | 18499227-T-TC | P4_Prx | ** | |||||
13907622-C-A | 11786916-C-A | ** | ||||||
16121685-A-AG | 14009805-A-AG | P8_Prx | ** | |||||
56838539-T-A | ** | |||||||
56838551-T-C | ** | |||||||
6714682-C-A | 6846641-C-A | ** | ||||||
15424299-G-T | 13312419-G-T | ** | ||||||
23186126-C-A | 21024240-C-A | ** | ||||||
28530779-C-A | 26384632-C-A | ** | ||||||
11009179-C-A | ** | |||||||
2759574-A-G | 2891533-A-G | ** | ||||||
5458579-C-A | 5590538-C-A | ** | ||||||
20022467-T-G | 17910587-T-G | P5_Prx | ** | |||||
18368636-G-GTT | 16256756-G-GTT | P6_Prx | ** | |||||
28673606-C-A | 26527459-C-A | ** | ||||||
15248269-C-A | 13136355-C-A | ** | ||||||
14332552-C-A | 12211846-C-A | ** | ||||||
20886124-G-GA | 18724238-G-GA | P4_Dst | ** | |||||
14405003-C-A | 12284300-C-A | ** | ||||||
8761567-T-C | 8893526-T-C | ** | ||||||
17319827-C-A | 15207947-C-A | ** | ||||||
10958549-T-C | ** | |||||||
18189411-C-A | 16077531-C-A | ** | ||||||
8734970-C-A | 8866929-C-A | ** | ||||||
21394578-C-A | 19232692-C-A | ** | ||||||
15424304-C-T | 13312424-C-T | ** | ||||||
16550940-C-A | 14439060-C-A | ** | ||||||
16579-A-G | ** | |||||||
4201809-C-A | 4333768-C-A | ** | ||||||
14136205-C-A | 12015499-C-A | ** | ||||||
7650551-C-A | 7782510-C-A | ** | ||||||
25466621-G-T | 23320474-G-T | P2_r2 | ** | |||||
2766761-C-A | 2898720-C-A | ** | ||||||
18687532-A-T | 16575652-A-T | ** | ||||||
15557928-C-A | 13446048-C-A | ** | ||||||
4271322-T-C | 4403281-T-C | ** | ||||||
5011556-C-A | 5143515-C-A | ** | ||||||
13894237-C-A | 11773531-C-A | ** | ||||||
10816432-G-T | ** | |||||||
8095347-C-A | 8227306-C-A | ** | ||||||
13467952-C-A | 11312276-C-A | ** | ||||||
13298072-C-A | 11142396-C-A | ** | ||||||
17467068-G-T | 15355188-G-T | ** | ||||||
7237176-C-A | 7369135-C-A | ** | ||||||
13433296-A-T | 11277620-A-T | ** | ||||||
18242062-C-A | 16130182-C-A | ** | ||||||
13998159-C-A | 11877453-C-A | ** | ||||||
10821837-C-A | ** | |||||||
11022888-A-AATCTATTCCG | ** | |||||||
6816735-T-A | 6948694-T-A | ** | ||||||
7116058-C-A | 7248017-C-A | ** | ||||||
14934404-A-G | 12822469-A-G | ** | ||||||
22916820-G-A | 20754934-G-A | ** | ||||||
24614127-T-A | 22467980-T-A | P3_t2 | ** | |||||
28798701-CTGGAA-C | 26652554-CTGGAA-C | 4×TGGAA | ** | |||||
28795713-A-AG | 26649566-A-AG | ** | ||||||
11012331-T-G | ** | |||||||
7409680-C-A | 7541639-C-A | ** | ||||||
6755896-T-C | 6887855-T-C | ** | ||||||
21974776-C-A | 19812890-C-A | ** | ||||||
16539585-C-A | 14427705-C-A | ** | ||||||
21134999-T-A | 18973113-T-A | ** | ||||||
11009918-G-T | ** | |||||||
10800856-A-ACTCTT | ** | |||||||
10800884-T-G | ** | |||||||
10800887-A-G | ** | |||||||
28506731-A-T | 26360584-A-T | ** | ||||||
4087837-T-C | 4219796-T-C | ** | ||||||
10868050-CGTCCATTCCCCTCCA-C | ** | |||||||
16308178-C-A | 14196298-C-A | ** | ||||||
23505120-C-A | 21343234-C-A | ** | ||||||
21141437-C-A | 18979551-C-A | ** | ||||||
2665433-C-A | 2797392-C-A | ** | ||||||
2744865-G-T | 2876824-G-T | ** | ||||||
2755400-C-A | 2887359-C-A | ** | ||||||
2774891-T-C | 2906850-T-C | ** | ||||||
2852533-G-C | 2984492-G-C | ** | ||||||
3061213-A-C | 3193172-A-C | ** | ||||||
3102947-C-A | 3234906-C-A | ** | ||||||
3332137-C-A | 3464096-C-A | ** | ||||||
3591186-G-C | 3723145-G-C | ** | ||||||
3652823-G-T | 3784782-G-T | ** | ||||||
3793224-G-T | 3925183-G-T | ** | ||||||
3793289-A-T | 3925248-A-T | ** | ||||||
3798907-T-C | 3930866-T-C | ** | ||||||
3821669-A-T | 3953628-A-T | ** | ||||||
3951365-A-G | 4083324-A-G | ** | ||||||
4470812-G-A | 4602771-G-A | ** | ||||||
4492421-C-A | 4624380-C-A | ** | ||||||
4553056-TCA-T | 4685015-TCA-T | ** | ||||||
4639403-T-C | 4771362-T-C | ** | ||||||
4687493-G-A | 4819452-G-A | ** | ||||||
4951857-A-G | 5083816-A-G | ** | ||||||
5056824-C-A | 5188783-C-A | ** | ||||||
5088260-G-T | 5220219-G-T | ** | ||||||
5171608-C-A | 5303567-C-A | ** | ||||||
5188661-A-G | 5320620-A-G | ** | ||||||
5194204-C-A | 5326163-C-A | ** | ||||||
5211927-T-G | 5343886-T-G | ** | ||||||
5415326-C-G | 5547285-C-G | ** | ||||||
5415328-ATCT-A | 5547287-ATCT-A | ** | ||||||
5523098-C-A | 5655057-C-A | ** | ||||||
5560063-C-G | 5692022-C-G | ** | ||||||
5592218-G-T | 5724177-G-T | ** | ||||||
5644647-G-T | 5776606-G-T | FT259227 | ** | |||||
5715151-G-T | 5847110-G-T | ** | ||||||
5732511-G-T | 5864470-G-T | ** | ||||||
5805569-G-A | 5937528-G-A | ** | ||||||
5824705-T-C | 5956664-T-C | ** | ||||||
6010434-C-A | 6142393-C-A | ** | ||||||
6194417-A-G | 6326376-A-G | IR3_Dst | ** | |||||
6428578-C-A | 6560537-C-A | ** | ||||||
6531318-C-G | 6663277-C-G | ** | ||||||
6634118-T-C | 6766077-T-C | ** | ||||||
6642743-G-A | 6774702-G-A | ** | ||||||
6685087-A-C | 6817046-A-C | ** | ||||||
6756882-C-T | 6888841-C-T | ** | ||||||
6886770-C-A | 7018729-C-A | ** | ||||||
6922842-C-A | 7054801-C-A | ** | ||||||
7053702-C-A | 7185661-C-A | ** | ||||||
7092470-G-A | 7224429-G-A | ** | ||||||
7183015-C-T | 7314974-C-T | ** | ||||||
7242655-G-A | 7374614-G-A | ** | ||||||
7294475-G-C | 7426434-G-C | ** | ||||||
7590567-T-C | 7722526-T-C | ** | ||||||
7608352-G-A | 7740311-G-A | ** | ||||||
7758155-AG-A | 7890114-AG-A | ** | ||||||
7970298-C-A | 8102257-C-A | ** | ||||||
8045380-C-A | 8177339-C-A | ** | ||||||
8092684-G-T | 8224643-G-T | ** | ||||||
8095330-T-C | 8227289-T-C | ** | ||||||
8095339-T-C | 8227298-T-C | ** | ||||||
8095344-A-T | 8227303-A-T | ** | ||||||
8095357-TAC-T | 8227316-TAC-T | ** | ||||||
8095367-A-T | 8227326-A-T | ** | ||||||
8095368-T-C | 8227327-T-C | ** | ||||||
8095370-TAC-T | 8227329-TAC-T | ** | ||||||
8109905-C-A | 8241864-C-A | ** | ||||||
8325394-T-C | 8457353-T-C | ** | ||||||
8481891-T-C | 8613850-T-C | ** | ||||||
8501627-C-A | 8633586-C-A | ** | ||||||
8556144-C-A | 8688103-C-A | ** | ||||||
8741839-GT-G | 8873798-GT-G | ** | ||||||
8749161-T-C | 8881120-T-C | ** | ||||||
8761550-C-T | 8893509-C-T | ** | ||||||
8799616-T-C | 8931575-T-C | ** | ||||||
9434476-C-A | 9596867-C-A | ** | ||||||
9513524-C-G | 9675915-C-G | ** | ||||||
9925425-G-T | 10087816-G-T | ** | ||||||
10025315-G-A | 10187706-G-A | ** | ||||||
10746025-T-C | FT59720 | ** | ||||||
10764595-C-G | ** | |||||||
10789875-C-A | ** | |||||||
10792660-C-A | ** | |||||||
10800850-C-CACTCT | ** | |||||||
10832410-C-A | ** | |||||||
10838819-C-A | ** | |||||||
10843847-C-A | ** | |||||||
10847158-C-A | ** | |||||||
10876831-C-A | ** | |||||||
10911515-C-A | ** | |||||||
10944084-G-T | ** | |||||||
10989510-A-C | ** | |||||||
10994650-A-C | FT439604 | ** | ||||||
11022933-A-ACTCCT | ** | |||||||
11031487-A-G | ** | |||||||
13213443-C-T | 11057767-C-T | ** | ||||||
13282785-C-A | 11127109-C-A | ** | ||||||
13461495-C-T | 11305819-C-T | ** | ||||||
13469602-T-C | 11313926-T-C | ** | ||||||
13474456-C-A | 11318780-C-A | ** | ||||||
13494101-C-A | 11338425-C-A | FT48585 | ** | |||||
13512587-C-T | 11356911-C-T | ** | ||||||
13546608-G-A | 11390932-G-A | ** | ||||||
13576124-T-TC | 11420448-T-TC | ** | ||||||
13578567-G-A | 11422891-G-A | ** | ||||||
13623637-C-T | 11467961-C-T | ** | ||||||
13710039-G-A | 11554363-G-A | ** | ||||||
11652995-G-A | ** | |||||||
11659859-T-G | ** | |||||||
13818084-A-G | 11697378-A-G | FT198537 | ** | |||||
13966812-C-A | 11846106-C-A | ** | ||||||
14012318-A-G | 11891612-A-G | FT143707 | ** | |||||
14021224-C-A | 11900518-C-A | ** | ||||||
14037974-A-C | 11917268-A-C | ** | ||||||
14174592-A-C | 12053886-A-C | ** | ||||||
14174628-T-C | 12053922-T-C | ** | ||||||
14219526-C-A | 12098820-C-A | ** | ||||||
14313679-T-C | 12192973-T-C | ** | ||||||
14328362-T-A | 12207656-T-A | ** | ||||||
14423795-C-T | 12303070-C-T | ** | ||||||
14431449-G-T | 12310722-G-T | ** | ||||||
14488231-C-A | 12367500-C-A | ** | ||||||
14561777-C-A | 12449978-C-A | ** | ||||||
14579501-CT-C | 12467701-CT-C | ** | ||||||
14720434-T-C | 12608502-T-C | ** | ||||||
14742050-C-T | 12630118-C-T | ** | ||||||
14934419-C-A | 12822484-C-A | ** | ||||||
14977379-C-A | 12865454-C-A | ** | ||||||
15038212-G-T | 12926302-G-T | ** | ||||||
15172758-C-A | 13060844-C-A | ** | ||||||
15178364-G-C | 13066450-G-C | ** | ||||||
15290197-C-A | 13178296-C-A | ** | ||||||
15397447-C-A | 13285567-C-A | ** | ||||||
15410632-TCAAAAA-T | 13298752-TCAAAAA-T | ** | ||||||
15424306-G-T | 13312426-G-T | ** | ||||||
15424310-G-A | 13312430-G-A | ** | ||||||
15424777-C-A | 13312897-C-A | ** | ||||||
15480359-A-C | 13368479-A-C | FTB76143 | ** | |||||
15533655-T-A | 13421775-T-A | ** | ||||||
15566796-T-A | 13454916-T-A | ** | ||||||
15585070-G-T | 13473190-G-T | ** | ||||||
15650619-C-A | 13538739-C-A | ** | ||||||
15732138-A-T | 13620258-A-T | ** | ||||||
15917559-G-C | 13805679-G-C | ** | ||||||
15932175-C-A | 13820295-C-A | ** | ||||||
15937079-G-T | 13825199-G-T | ** | ||||||
15941374-C-A | 13829494-C-A | ** | ||||||
15995549-C-A | 13883669-C-A | ** | ||||||
15995689-C-A | 13883809-C-A | ** | ||||||
16041406-C-A | 13929526-C-A | ** | ||||||
16091239-T-G | 13979359-T-G | ** | ||||||
16095723-A-G | 13983843-A-G | ** | ||||||
16121599-A-G | 14009719-A-G | P8_Prx | ** | |||||
16176597-A-C | 14064717-A-C | ** | ||||||
16466237-TC-T | 14354357-TC-T | ** | ||||||
16466242-A-T | 14354362-A-T | ** | ||||||
16466251-C-T | 14354371-C-T | ** | ||||||
16490965-C-G | 14379085-C-G | ** | ||||||
16652969-C-A | 14541089-C-A | ** | ||||||
16689722-T-C | 14577842-T-C | ** | ||||||
16703845-C-T | 14591965-C-T | FT261104 | ** | |||||
16739569-G-A | 14627689-G-A | ** | ||||||
16860726-T-G | 14748846-T-G | FTB76403 | ** | |||||
16968287-A-T | 14856407-A-T | ** | ||||||
16989281-G-T | 14877401-G-T | ** | ||||||
17032569-A-T | 14920689-A-T | ** | ||||||
17056809-A-G | 14944929-A-G | ** | ||||||
17125992-A-G | 15014112-A-G | ** | ||||||
17251058-C-A | 15139178-C-A | ** | ||||||
17284636-C-A | 15172756-C-A | ** | ||||||
17306596-CCT-C | 15194716-CCT-C | ** | ||||||
17374562-G-T | 15262682-G-T | ** | ||||||
17505341-A-G | 15393461-A-G | ** | ||||||
17604977-C-T | 15493097-C-T | ** | ||||||
17653959-C-A | 15542079-C-A | ** | ||||||
17860694-C-A | 15748814-C-A | ** | ||||||
18022313-G-T | 15910433-G-T | ** | ||||||
18058670-T-A | 15946790-T-A | ** | ||||||
18071544-C-A | 15959664-C-A | ** | ||||||
18089045-C-T | 15977165-C-T | ** | ||||||
18101971-G-C | 15990091-G-C | ** | ||||||
18119505-G-A | 16007625-G-A | ** | ||||||
18133288-A-G | 16021408-A-G | ** | ||||||
18189065-G-T | 16077185-G-T | ** | ||||||
18201648-C-A | 16089768-C-A | ** | ||||||
18270171-C-A | 16158291-C-A | ** | ||||||
18282599-G-C | 16170719-G-C | P6_Prx | ** | |||||
18682612-T-C | 16570732-T-C | ** | ||||||
18682657-T-A | 16570777-T-A | ** | ||||||
18735675-T-TC | 16623795-T-TC | ** | ||||||
18793417-A-T | 16681537-A-T | ** | ||||||
18819629-T-G | 16707749-T-G | ** | ||||||
18850627-C-A | 16738747-C-A | ** | ||||||
18949717-G-T | 16837837-G-T | ** | ||||||
18994517-C-A | 16882637-C-A | ** | ||||||
19052114-C-A | 16940234-C-A | ** | ||||||
19053448-T-A | 16941568-T-A | ** | ||||||
19126338-T-G | 17014458-T-G | ** | ||||||
19418321-G-T | 17306441-G-T | ** | ||||||
19438358-G-T | 17326478-G-T | ** | ||||||
19499149-A-T | 17387269-A-T | ** | ||||||
19505491-G-T | 17393611-G-T | ** | ||||||
19544071-A-T | 17432191-A-T | ** | ||||||
19646469-G-T | 17534589-G-T | FGC59781 | P5_Prx | ** | ||||
19668809-A-AC | 17556929-A-AC | P5_Prx | ** | |||||
19677904-A-ACAGCCCCAT | 17566024-A-ACAGCCCCAT | P5_Prx | ** | |||||
19677915-C-CT | 17566035-C-CT | P5_Prx | ** | |||||
19732403-C-A | 17620523-C-A | P5_Prx | ** | |||||
19817536-T-G | 17705656-T-G | P5_Prx | ** | |||||
19817537-C-CAT | 17705657-C-CAT | P5_Prx | 22×A | ** | ||||
19817571-C-T | 17705691-C-T | P5_Prx | ** | |||||
19947762-G-GTTA | 17835882-G-GTTA | P5_Prx | ** | |||||
20062989-G-T | 17951109-G-T | P5_Prx | ** | |||||
20142853-A-T | 18030973-A-T | P5_Dst | ** | |||||
20255079-G-A | 18093193-G-A | P5_Dst | ** | |||||
20255094-T-A | 18093208-T-A | P5_Dst | 20×A | ** | ||||
20631063-A-G | 18469177-A-G | P4_Prx | ** | |||||
20631068-ATC-A | 18469182-ATC-A | P4_Prx | ** | |||||
20661063-T-G | 18499177-T-G | P4_Prx | ** | |||||
20661146-T-C | 18499260-T-C | P4_Prx | ** | |||||
20824883-C-A | 18662997-C-A | P4_Gap | ** | |||||
21134987-T-C | 18973101-T-C | ** | ||||||
21134998-C-A | 18973112-C-A | ** | ||||||
21135015-T-C | 18973129-T-C | ** | ||||||
21135018-G-C | 18973132-G-C | ** | ||||||
21135023-G-A | 18973137-G-A | FT79854 | ** | |||||
21208998-C-A | 19047112-C-A | ** | ||||||
21235125-G-C | 19073239-G-C | ** | ||||||
21281405-C-A | 19119519-C-A | ** | ||||||
21379762-CAACACA-C | 19217876-CAACACA-C | ** | ||||||
21389842-C-A | 19227956-C-A | ** | ||||||
21555502-G-A | 19393616-G-A | ** | ||||||
21624795-C-T | 19462909-C-T | ** | ||||||
21840886-T-C | 19679000-T-C | ** | ||||||
21875919-G-A | 19714033-G-A | ** | ||||||
22079957-C-A | 19918071-C-A | ** | ||||||
22084713-C-A | 19922827-C-A | ** | ||||||
22170284-T-G | 20008398-T-G | ** | ||||||
22301375-C-T | 20139489-C-T | DYZ19 | ** | |||||
22810905-C-A | 20649019-C-A | ** | ||||||
23181478-A-AG | 21019592-A-AG | ** | ||||||
23252794-C-A | 21090908-C-A | ** | ||||||
23360881-C-A | 21198995-C-A | ** | ||||||
23372103-G-A | 21210217-G-A | ** | ||||||
23373070-C-A | 21211184-C-A | ** | ||||||
24148184-C-A | 22002037-C-A | P3_b1 | ** | |||||
24245790-T-G | 22099643-T-G | P3_b1 | ** | |||||
25333766-A-G | 23187619-A-G | P2_r1 | ** | |||||
26276068-C-A | 24129921-C-A | P1_Y1 | ** | |||||
28484346-A-T | 26338199-A-T | ** | ||||||
28542445-A-C | 26396298-A-C | ** | ||||||
28544289-T-A | 26398142-T-A | ** | ||||||
28544443-C-A | 26398296-C-A | ** | ||||||
28545686-C-A | 26399539-C-A | ** | ||||||
28560256-A-T | 26414109-A-T | ** | ||||||
28621964-GC-G | 26475817-GC-G | ** | ||||||
28660079-A-C | 26513932-A-C | ** | ||||||
28698680-A-G | 26552533-A-G | ** | ||||||
28803979-G-A | 26657832-G-A | ** | ||||||
56822192-G-T | ** | |||||||
34298-T-C | ** | |||||||
6792628-C-A | 6924587-C-A | 18×A | *** | |||||
13448841-T-C | 11293165-T-C | *** | ||||||
13448757-TCCTCTCCACC-T | 11293081-TCCTCTCCACC-T | *** | ||||||
6915819-G-T | 7047778-G-T | *** | ||||||
2773714-T-G | 2905673-T-G | *** | ||||||
8843535-TA-T | 8975494-TA-T | *** | ||||||
18147545-A-G | 16035665-A-G | *** | ||||||
19007641-C-T | 16895761-C-T | FTB33968 | *** | |||||
21142834-CAAA-C | 18980948-CAAA-C | 16×A | *** | |||||
14656150-TCAA-T | 12544215-TCAA-T | *** | ||||||
21240495-C-A | 19078609-C-A | *** | ||||||
22189252-G-A | 20027366-G-A | BY138324 | *** | |||||
3833649-T-A | 3965608-T-A | *** | ||||||
10772466-C-T | *** | |||||||
10661184-TTCCACTCCAT-T,TTCCACCC | *** | |||||||
17584170-G-C | 15472290-G-C | *** | ||||||
14061355-C-T | 11940649-C-T | *** | ||||||
7179759-TG-T | 7311718-TG-T | *** | ||||||
16246053-G-T | 14134173-G-T | *** | ||||||
21202526-C-A | 19040640-C-A | *** | ||||||
11022022-A-ACTCTATGCTG | *** | |||||||
11022040-C-A | *** | |||||||
15325006-TTAAA-T | 13213124-TTAAA-T | 7×TAAA | *** | |||||
17170188-TG-T | 15058308-TG-T | *** | ||||||
14937028-AT-A | 12825093-AT-A | 9×T | *** | |||||
19345116-C-A | 17233236-C-A | *** | ||||||
7233279-C-A | 7365238-C-A | *** | ||||||
10755386-CCACTCATCTCTGTTT-C,CCACTCCTCTCTGTTC | *** | |||||||
14061349-A-T | 11940643-A-T | *** | ||||||
13821177-A-AGGAATGGAAT | 11700471-A-AGGAATGGAAT | 10×GGAAT | *** | |||||
16175037-CTT-C,CT | 14063157-CTT-C,CT | 14×T | *** | |||||
13856688-C-A | 11735982-C-A | *** | ||||||
2752988-A-G | 2884947-A-G | *** | ||||||
10980813-C-A | *** | |||||||
24278183-CAAGA-C,CAAGAAAGA | 22132036-CAAGA-C,CAAGAAAGA | P3_b1 | 22×AAGA | *** | ||||
14639295-C-A | 12527364-C-A | *** | ||||||
19226457-C-A | 17114577-C-A | *** | ||||||
10870016-C-A | *** | |||||||
23475257-CTTTT-C,CTTTTT | 21313371-CTTTT-C,CTTTTT | 15×T | *** | |||||
9403225-T-C | 9565616-T-C | *** | ||||||
10968401-C-A | *** | |||||||
14359911-G-A | 12239206-G-A | *** | ||||||
18848546-G-T | 16736666-G-T | *** | ||||||
15285991-C-A | 13174090-C-A | *** | ||||||
3131139-C-A | 3263098-C-A | *** | ||||||
13488074-C-A | 11332398-C-A | *** | ||||||
56830310-TGCCATTCCAT-T,TGACTCCATTCCAC | *** | |||||||
18029603-C-A | 15917723-C-A | *** | ||||||
17895175-ATTTT-A,ATTT | 15783295-ATTTT-A,ATTT | 21×T | *** | |||||
8736143-C-A | 8868102-C-A | *** | ||||||
10980839-C-A | *** | |||||||
6213828-C-A | 6345787-C-A | IR3_Dst | *** | |||||
2773691-TA-T,TAAA | 2905650-TA-T,TAAA | 19×A | *** | |||||
16476423-C-A | 14364543-C-A | *** | ||||||
10652555-C-A | *** | |||||||
7014680-A-T | 7146639-A-T | *** | ||||||
9403223-T-C | 9565614-T-C | *** | ||||||
9403241-T-C | 9565632-T-C | *** | ||||||
10657275-C-T | *** | |||||||
10820658-C-G | *** | |||||||
13213882-G-T | 11058206-G-T | *** | ||||||
13450107-CACTCCACCCCATCCCATCCCATTCT-C,CATTCCATTCCATTCCATTCC | 11294431-CACTCCACCCCATCCCATCCCATTCT-C,CATTCCATTCCATTCCATTCC | *** | ||||||
13456113-C-A | 11300437-C-A | *** | ||||||
13466046-A-G | 11310370-A-G | *** | ||||||
13485170-T-C | 11329494-T-C | *** | ||||||
11676643-G-A | *** | |||||||
13999315-G-A | 11878609-G-A | *** | ||||||
14270441-C-A | 12149735-C-A | *** | ||||||
14570109-A-G | 12458309-A-G | *** | ||||||
15285974-C-A | 13174073-C-A | *** | ||||||
15288503-C-A | 13176602-C-A | *** | ||||||
18793565-G-A | 16681685-G-A | *** | ||||||
19012423-C-A | 16900543-C-A | *** | ||||||
19123394-C-A | 17011514-C-A | *** | ||||||
19235796-C-A | 17123916-C-A | *** | ||||||
19461150-T-C | 17349270-T-C | *** | ||||||
22487808-G-T | 20325922-G-T | DYZ19 | *** | |||||
22783190-G-C | 20621304-G-C | *** | ||||||
24446752-A-G | 22300605-A-G | *** | ||||||
56826358-C-T | *** | |||||||
56827453-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.